WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? PP58941 Name  Ppa-HPO-29
Molecular Weight (kDa)  195.5 Length  1717
Organism  Pristionchus pacificus MD5 Checksum  5cbc52569ab501b0f78cf7e10fafb820
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Pristionchus pacificus 54126

Proteins

1 Sequence

Length
1717
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA40040 PPA40040   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase P. pacificus protein sequence (Fasta)  

32 Motifs

WormBase ID
PFSCAN:PS50005
SUPERFAMILY:SSF48452
PFSCAN:PS50293
INTERPRO:IPR011990
PFSCAN:PS50294
SMART:SM00320
PFAM:PF00400
SUPERFAMILY:SSF50978
INTERPRO:IPR001680
INTERPRO:IPR015943
INTERPRO:IPR036322
PFSCAN:PS50082
SUPERFAMILY:SSF46689
INTERPRO:IPR009057
SMART:SM00028
INTERPRO:IPR019734
INTERPRO:IPR006594
SMART:SM00667
PFSCAN:PS50896
PRINTS:PR00320
SCANPROSITE:PS00678
INTERPRO:IPR020472
SUPERFAMILY:SSF109925
INTERPRO:IPR021183
HMMPANTHER:PTHR22767
HMMPANTHER:PTHR22767:SF2
PFAM:PF12569
INTERPRO:IPR023082
PFAM:PF05044
INTERPRO:IPR037131