WormMine: GOTerm GO:0001162 RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding GO

• Namespace: molecular_function
• Obsolete: false
• Description: Binding to an RNA polymerase II intronic DNA sequence that regulates the transcription of the transcript it is contained within.

0 Cross References

1 Data Sets

• GO Annotation data set

1 Ontology

• Name: GO

2 Ontology Annotations

12 Parents

Identifier	Name	Description
GO:0003674	molecular_function	A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs.
GO:0005488	binding	The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO:0003676	nucleic acid binding	Binding to a nucleic acid.
GO:1990837	sequence-specific double-stranded DNA binding	Binding to double-stranded DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA, e.g. promotor binding or rDNA binding.
GO:0003677	DNA binding	Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0003690	double-stranded DNA binding	Binding to double-stranded DNA.
GO:0043565	sequence-specific DNA binding	Binding to DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
GO:0001067	transcription regulatory region nucleic acid binding	Binding to a nucleic acid region that regulates a nucleic acid-based process. Such processes include transcription, DNA replication, and DNA repair.
GO:0000976	transcription cis-regulatory region binding	Binding to a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon.
GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Binding to a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II.
GO:0001161	intronic transcription regulatory region sequence-specific DNA binding	Binding to an intronic DNA sequence that regulates the transcription of the transcript it is contained within.
GO:0001162	RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding	Binding to an RNA polymerase II intronic DNA sequence that regulates the transcription of the transcript it is contained within.

11 Relations

Relationship	Parent Term . Identifier	Child Term . Identifier
is_a	GO:0001161	GO:0001162
is_a	GO:0000977	GO:0001162
is_a	GO:0001067	GO:0001162
is_a	GO:0003674	GO:0001162
is_a	GO:0003677	GO:0001162
is_a	GO:0003676	GO:0001162
is_a	GO:0000976	GO:0001162
is_a	GO:0003690	GO:0001162
is_a	GO:0043565	GO:0001162
is_a	GO:1990837	GO:0001162
is_a	GO:0005488	GO:0001162

0 Synonyms