WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

GO Term : GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding GO

Namespace  molecular_function Obsolete  false
Description  Binding to a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II.

0 Cross References

1 Data Sets

Name URL
GO Annotation data set  

1 Ontology

Name
GO

137 Ontology Annotations

Annotation Extension Qualifier
has_input(WB:WBGene00003033)|has_input(WB:WBGene00000247)|has_input(WB:WBGene00002980) enables
  enables
has_input(WB:WBGene00004804) enables
  enables
  enables
  enables
has_input(WB:WBGene00011315) enables
  enables
has_input(WB:WBGene00001170) contributes_to
  enables
  enables
  enables
has_input(WB:WBGene00001534) enables
  enables
  enables
has_input(WB:WBGene00001170) enables
has_input(WB:WBGene00003033)|has_input(WB:WBGene00000247) enables
has_input(WB:WBGene00000457)|has_input(WB:WBGene00001532) enables
  enables
  contributes_to
  enables
has_input(WB:WBGene00003033) enables
has_input(WB:WBGene00001250) enables
  enables
has_input(WB:WBGene00003024) enables
has_input(WB:WBGene00018725) enables
  enables
  enables
  enables
  enables

10 Parents

Identifier Name Description
GO:0003674 molecular_function A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs.
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO:0003676 nucleic acid binding Binding to a nucleic acid.
GO:1990837 sequence-specific double-stranded DNA binding Binding to double-stranded DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA, e.g. promotor binding or rDNA binding.
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0003690 double-stranded DNA binding Binding to double-stranded DNA.
GO:0043565 sequence-specific DNA binding Binding to DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
GO:0001067 transcription regulatory region nucleic acid binding Binding to a nucleic acid region that regulates a nucleic acid-based process. Such processes include transcription, DNA replication, and DNA repair.
GO:0000976 transcription cis-regulatory region binding Binding to a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon.
GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding Binding to a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II.

45 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
is_a GO:0000976 GO:0000977
is_a GO:0003677 GO:0000977
is_a GO:0003690 GO:0000977
is_a GO:1990837 GO:0000977
is_a GO:0043565 GO:0000977
is_a GO:0003674 GO:0000977
is_a GO:0001067 GO:0000977
is_a GO:0003676 GO:0000977
is_a GO:0005488 GO:0000977
is_a GO:0000977 GO:0000978
is_a GO:0000977 GO:0000979
has part GO:0000977 GO:0000981
has part GO:0000977 GO:0000981
is_a GO:0000977 GO:0001162
has part GO:0000977 GO:0001227
has part GO:0000977 GO:0001227
has part GO:0000977 GO:0001228
has part GO:0000977 GO:0001228
has part GO:0000977 GO:0003707
has part GO:0000977 GO:0004879
has part GO:0000977 GO:0004883
is_a GO:0000977 GO:0010736
has part GO:0000977 GO:0030284
has part GO:0000977 GO:0031963
is_a GO:0000977 GO:0032810
is_a GO:0000977 GO:0034056
is_a GO:0000977 GO:0035497
is_a GO:0000977 GO:0035538
has part GO:0000977 GO:0038185
has part GO:0000977 GO:0038186

2 Synonyms

Name Type
GO:0001012 alt_id
RNA polymerase II regulatory region DNA binding synonym