WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

GO Term : GO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation GO

Namespace  biological_process Obsolete  false
Description  The process during cotranslational membrane targeting wherein proteins move across a membrane. SRP and its receptor initiate the transfer of the nascent chain across the endoplasmic reticulum (ER) membrane; they then dissociate from the chain, which is transferred to a set of transmembrane proteins, collectively called the translocon. Once the nascent chain translocon complex is assembled, the elongating chain passes directly from the large ribosomal subunit into the centers of the translocon, a protein-lined channel within the membrane. The growing chain is never exposed to the cytosol and does not fold until it reaches the ER lumen.

0 Cross References

1 Data Sets

Name URL
GO Annotation data set  

1 Ontology

Name
GO

15 Ontology Annotations

Annotation Extension Qualifier
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34 Parents

Identifier Name Description
GO:0009987 cellular process Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
GO:0051179 localization Any process in which a cell, a substance, or a cellular entity, such as a protein complex or organelle, is transported, tethered to or otherwise maintained in a specific location. In the case of substances, localization may also be achieved via selective degradation.
GO:0008150 biological_process A biological process is the execution of a genetically-encoded biological module or program. It consists of all the steps required to achieve the specific biological objective of the module. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence.
GO:0051234 establishment of localization Any process that localizes a substance or cellular component. This may occur via movement, tethering or selective degradation.
GO:0006810 transport The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or a transporter complex, a pore or a motor protein.
GO:0055085 transmembrane transport The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other.
GO:0005575 cellular_component A location, relative to cellular compartments and structures, occupied by a macromolecular machine. There are three types of cellular components described in the gene ontology: (1) the cellular anatomical entity where a gene product carries out a molecular function (e.g., plasma membrane, cytoskeleton) or membrane-enclosed compartments (e.g., mitochondrion); (2) virion components, where viral proteins act, and (3) the stable macromolecular complexes of which gene product are parts (e.g., the clathrin complex).
GO:0005622 intracellular anatomical structure A component of a cell contained within (but not including) the plasma membrane. In eukaryotes it includes the nucleus and cytoplasm.
GO:0110165 cellular anatomical structure A part of a cellular organism consisting of a material entity with granularity above the level of a protein complex but below that of an anatomical system. Note that cellular organisms exclude viruses.
GO:0051649 establishment of localization in cell Any process, occurring in a cell, that localizes a substance or cellular component. This may occur via movement, tethering or selective degradation.
GO:0051641 cellular localization A cellular localization process whereby a substance or cellular entity, such as a protein complex or organelle, is transported to, and/or maintained in, a specific location within a cell including the localization of substances or cellular entities to the cell membrane.
GO:0046907 intracellular transport The directed movement of substances within a cell.
GO:0071705 nitrogen compound transport The directed movement of nitrogen-containing compounds into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0033036 macromolecule localization Any process in which a macromolecule is transported to, or maintained in, a specific location.
GO:0051668 localization within membrane Any process in which a substance or cellular entity, such as a protein complex or organelle, is transported to, and/or maintained in, a specific location within a membrane.
GO:0008104 protein localization Any process in which a protein is transported to, or maintained in, a specific location.
GO:0070727 cellular macromolecule localization Any process in which a macromolecule is transported to, and/or maintained in, a specific location at the level of a cell. Localization at the cellular level encompasses movement within the cell, from within the cell to the cell surface, or from one location to another at the surface of a cell.
GO:0015031 protein transport The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0045184 establishment of protein localization The directed movement of a protein to a specific location.
GO:0006605 protein targeting The process of targeting specific proteins to particular regions of the cell, typically membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif.
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0072594 establishment of protein localization to organelle The directed movement of a protein to a specific location on or in an organelle. Encompasses establishment of localization in the membrane or lumen of a membrane-bounded organelle.
GO:0033365 protein localization to organelle A process in which a protein is transported to, or maintained in, a location within an organelle.
GO:0006612 protein targeting to membrane The process of directing proteins towards a membrane, usually using signals contained within the protein.
GO:0090150 establishment of protein localization to membrane The directed movement of a protein to a specific location in a membrane.
GO:0072657 protein localization to membrane A process in which a protein is transported to, or maintained in, a specific location in a membrane.
GO:0006613 cotranslational protein targeting to membrane The targeting of proteins to a membrane that occurs during translation. The transport of most secretory proteins, particularly those with more than 100 amino acids, into the endoplasmic reticulum lumen occurs in this manner, as does the import of some proteins into mitochondria.
GO:0006614 SRP-dependent cotranslational protein targeting to membrane The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane.
GO:0045047 protein targeting to ER The process of directing proteins towards the endoplasmic reticulum (ER) using signals contained within the protein. One common mechanism uses a 16- to 30-residue signal sequence, typically located at the N-terminus of the protein and containing positively charged amino acids followed by a continuous stretch of hydrophobic residues, which directs the ribosome to the ER membrane and initiates transport of the growing polypeptide across the ER membrane.
GO:0072599 establishment of protein localization to endoplasmic reticulum The directed movement of a protein to a specific location in the endoplasmic reticulum.

42 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
is_a GO:0065002 GO:0006616
part of GO:0006614 GO:0006616
is_a GO:0015031 GO:0006616
is_a GO:0051649 GO:0006616
part of GO:0009987 GO:0006616
part of GO:0006612 GO:0006616
part of GO:0006613 GO:0006616
part of GO:0033036 GO:0006616
is_a GO:0009987 GO:0006616
part of GO:0051641 GO:0006616
occurs in GO:0005622 GO:0006616
is_a GO:0006810 GO:0006616
occurs in GO:0110165 GO:0006616
part of GO:0051668 GO:0006616
part of GO:0070727 GO:0006616
is_a GO:0071806 GO:0006616
is_a GO:0045184 GO:0006616
is_a GO:0051234 GO:0006616
is_a GO:0051179 GO:0006616
is_a GO:0008150 GO:0006616
is_a GO:0071705 GO:0006616
part of GO:0008104 GO:0006616
part of GO:0006605 GO:0006616
is_a GO:0046907 GO:0006616
part of GO:0072594 GO:0006616
is_a GO:0006886 GO:0006616
part of GO:0072599 GO:0006616
occurs in GO:0005575 GO:0006616
part of GO:0033365 GO:0006616
is_a GO:0055085 GO:0006616

4 Synonyms

Name Type
SRP-dependent cotranslational membrane targeting, translocation synonym
ER translocation synonym
translocation during SRP-dependent cotranslational protein targeting to membrane synonym
SRP-dependent cotranslational protein-membrane targeting, translocation synonym