WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Phenotype : WBPhenotype:0000650 defecation variant

Description  Animals exhibit variations in the processes involved in eliminating gut contents compared to control animals. In C. elegans the sequence of events during defecation includes posterior body contraction (pBoc), relaxation, anterior body contraction (aBoc), expulsion of gut contents by enteric muscle contraction (Emc) and opening of anus (Exp), and intercycle period (Wormatlas).

1 RNAi

WormBase ID
WBRNAi00077179

5 RNAi Not Observed

WormBase ID
WBRNAi00069743
WBRNAi00065975
WBRNAi00065976
WBRNAi00069168
WBRNAi00068785

5 Children

Identifier Name Description
WBPhenotype:0000207 defecation cycle variant Any variation in the stereotyped sequence of muscle contractions that result in defecation over a fixed time period compared to control .
WBPhenotype:0000651 constipated Animals exhibit delayed or infrequent passage and/or expulsion of fecal matter.
WBPhenotype:0000210 defecation contraction variant Any variation in the stereotyped muscle contractions that result in defecation compared to control . In C. elegans these contractions include posterior body contraction (pBoc), anterior body contraction (aBoc), expulsion of gut contents by enteric muscle contraction (Emc) and opening of anus (Exp).
WBPhenotype:0000391 defecation missing motor steps Animals lack one or more of the stereotyped muscle contractions that result in defecation compared to control. In C. elegans these contractions include posterior body contraction (pBoc), anterior body contraction (aBoc), expulsion of gut contents by enteric muscle contraction (Emc) and opening of anus (Exp).
WBPhenotype:0001091 larval defecation variant Animals exhibit variations in the elimination of fecal matter during the larval stage compared to control animals.

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Parents

Identifier Name Description
WBPhenotype:0000525 organism behavior variant Variations in the specific actions or reactions of an organism in response to external or internal stimuli compared to that observed in control organisms.

19 Phenotype Allele

Public Name
ra606
ra609
ra612
sa3
sa9
sa23
sa24
sa22
sa722
tm902
n4541
ut5
n693
ad418
e2519
e55
md125
ok1460
m1

15 Phenotype Allele Not Observed

Public Name
nc4
nc6
nc5
ut73
ag3
ok335
gk7
ju23
ag1
gk278
tm2267
tm2550
tm3082
n4545
n4330

1 Synonyms

Name Type
defecation abnormal