WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

GO Term : GO:0030201 heparan sulfate proteoglycan metabolic process GO

Namespace  biological_process Obsolete  false
Description  The chemical reactions and pathways involving heparan sulfate proteoglycans, which consist of a core protein linked to a heparan sulfate glycosaminoglycan. The heparan sulfate chain is composed of the repeating disaccharide unit beta-(1,4)-N-acetyl-D-glucosamine-alpha-(1,4)-hexuronic acid, the former being either sulfated or deacetylated on its amino group as well as sulfated on one of its hydroxyl groups, and the latter being a mixture of sulfated and nonsulfated D-glucuronic and L-iduronic acids.

0 Cross References

0 Data Sets

1 Ontology

Name
GO

0 Ontology Annotations

11 Parents

Identifier Name Description
GO:0009987 cellular process Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
GO:0008150 biological_process A biological process is the execution of a genetically-encoded biological module or program. It consists of all the steps required to achieve the specific biological objective of the module. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence.
GO:0044238 primary metabolic process The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism.
GO:0008152 metabolic process A cellular process consisting of the biochemical pathways by which a living organism transforms chemical substances. This includes including anabolism (biosynthetic process) and catabolism (catabolic process). Metabolic processes includes the transformation of small molecules, as well macromolecular processes such as DNA repair and replication, protein synthesis and degradation.
GO:0043170 macromolecule metabolic process The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
GO:0019538 protein metabolic process The chemical reactions and pathways involving a protein. Includes protein modification.
GO:0009100 glycoprotein metabolic process The chemical reactions and pathways involving glycoproteins, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide.
GO:1901135 carbohydrate derivative metabolic process The chemical reactions and pathways involving carbohydrate derivative.
GO:0006790 sulfur compound metabolic process The chemical reactions and pathways involving the nonmetallic element sulfur or compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione.
GO:0006029 proteoglycan metabolic process The chemical reactions and pathways involving proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans.
GO:0030201 heparan sulfate proteoglycan metabolic process The chemical reactions and pathways involving heparan sulfate proteoglycans, which consist of a core protein linked to a heparan sulfate glycosaminoglycan. The heparan sulfate chain is composed of the repeating disaccharide unit beta-(1,4)-N-acetyl-D-glucosamine-alpha-(1,4)-hexuronic acid, the former being either sulfated or deacetylated on its amino group as well as sulfated on one of its hydroxyl groups, and the latter being a mixture of sulfated and nonsulfated D-glucuronic and L-iduronic acids.

16 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
regulates GO:0030201 GO:0010908
positively regulates GO:0030201 GO:0010909
regulates GO:0030201 GO:0010909
is_a GO:0030201 GO:0015012
is_a GO:0030201 GO:0030200
is_a GO:0006790 GO:0030201
is_a GO:0006029 GO:0030201
is_a GO:0019538 GO:0030201
is_a GO:0008150 GO:0030201
is_a GO:0044238 GO:0030201
is_a GO:0043170 GO:0030201
is_a GO:0009987 GO:0030201
is_a GO:1901135 GO:0030201
is_a GO:0009100 GO:0030201
is_a GO:0008152 GO:0030201
part of GO:0030201 GO:0120532

4 Synonyms

Name Type
heparan sulphate proteoglycan metabolism synonym
heparin proteoglycan metabolic process synonym
heparan sulfate proteoglycan metabolism synonym
heparan sulphate proteoglycan metabolic process synonym