WormMine: Gene WBGene00113099

• WormBase Gene ID: WBGene00113099
• Gene Name: PPA23545
• Sequence Name: PPA23545
• Organism: Pristionchus pacificus
• Automated Description: Is predicted to encode a protein with the following domains: CAP domain; Cysteine-rich secretory protein-related; CAP superfamily; and Cysteine-rich secretory protein family. Is an ortholog of C. elegans C07A4.3.
• Biotype: SO:0001217
• Genetic Position: :±

1 Organism

• Name: Pristionchus pacificus
• Taxon Id: 54126

0 Synonyms

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:PPA23545.1	PPA23545.1		[unknown]

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:PPA23545	PPA23545		[unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

• WormBaseAcedbConverter

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
Bacteria infection: Xenorhabdus nematophila	Pristionchus pacificus Genes with expression levels changed significantly after treatment of Xenorhabdus nematophila.	Differential expression were calculated by empirical eBayes method using eBayes function. P_value <= 0.01 and log2 fold change > 1 were used to call differentially expressed genes in all datasets.	WBPaper00041606:PP_X.nematophila_regulated
	Pristionchus pacificus genes down regulated in the dauer versus dauer-exit worms.	The weight parameters were optimized based on MA-plots such that spike-in controls show their expected fold change values. lmFit function was used to fit a linear model to probe intensities across arrays, and differential expression was calculated by empirical Bayes method using the eBayes function. Control of FDR was employed as correction for multiple testing.	WBPaper00041207:PP_dauer_down

0 Expression Patterns

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term