WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

GO Term : GO:0090389 phagosome-lysosome fusion involved in apoptotic cell clearance GO

Namespace  biological_process Obsolete  false
Description  The creation of a phagolysosome from a phagosome and a lysosome as a part of apoptotic cell clearance.

0 Cross References

1 Data Sets

Name URL
GO Annotation data set  

1 Ontology

Name
GO

7 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  involved_in
  involved_in
  involved_in
  involved_in
  involved_in
  involved_in

31 Parents

Identifier Name Description
GO:0006996 organelle organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
GO:0009987 cellular process Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
GO:0051179 localization Any process in which a cell, a substance, or a cellular entity, such as a protein complex or organelle, is transported, tethered to or otherwise maintained in a specific location. In the case of substances, localization may also be achieved via selective degradation.
GO:0008150 biological_process A biological process is the execution of a genetically-encoded biological module or program. It consists of all the steps required to achieve the specific biological objective of the module. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence.
GO:0071840 cellular component organization or biogenesis A process that results in the biosynthesis of constituent macromolecules, assembly, arrangement of constituent parts, or disassembly of a cellular component.
GO:0016043 cellular component organization A process that results in the assembly, arrangement of constituent parts, or disassembly of a cellular component.
GO:0051234 establishment of localization Any process that localizes a substance or cellular component. This may occur via movement, tethering or selective degradation.
GO:0006810 transport The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or a transporter complex, a pore or a motor protein.
GO:0007033 vacuole organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a vacuole.
GO:0070925 organelle assembly The aggregation, arrangement and bonding together of a set of components to form an organelle. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
GO:0022607 cellular component assembly The aggregation, arrangement and bonding together of a cellular component.
GO:0044085 cellular component biogenesis A process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellular component. Includes biosynthesis of constituent macromolecules, and those macromolecular modifications that are involved in synthesis or assembly of the cellular component.
GO:0061024 membrane organization A process which results in the assembly, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO:0016192 vesicle-mediated transport A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
GO:0090174 organelle membrane fusion The joining of two lipid bilayers to form a single organelle membrane.
GO:0048284 organelle fusion The creation of a single organelle from two or more organelles.
GO:0061025 membrane fusion The membrane organization process that joins two lipid bilayers to form a single membrane.
GO:0098657 import into cell The directed movement of some substance from outside of a cell into a cell. This may occur via transport across the plasma membrane or via endocytosis.
GO:0016050 vesicle organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a vesicle.
GO:0001845 phagolysosome assembly The process that results in the fusion of a phagosome, a vesicle formed by phagocytosis, with a lysosome.
GO:0006909 phagocytosis A vesicle-mediated transport process that results in the engulfment of external particulate material by phagocytes and their delivery to the lysosome. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles.
GO:0090382 phagosome maturation A process that is carried out at the cellular level which results in the arrangement of constituent parts of a phagosome within a cell. Phagosome maturation begins with endocytosis and formation of the early phagosome and ends with the formation of the hybrid organelle, the phagolysosome.
GO:0007040 lysosome organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases.
GO:0006897 endocytosis A vesicle-mediated transport process in which cells take up external materials or membrane constituents by the invagination of a part of the plasma membrane to form a new membrane-bounded vesicle.
GO:0080171 lytic vacuole organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lytic vacuole.
GO:0006906 vesicle fusion Fusion of the membrane of a transport vesicle with its target membrane.
GO:0043277 apoptotic cell clearance The recognition and removal of an apoptotic cell by a neighboring cell or by a phagocyte.
GO:0090385 phagosome-lysosome fusion The creation of a phagolysosome from a phagosome and a lysosome.
GO:0090386 phagosome maturation involved in apoptotic cell clearance A process that is carried out at the cellular level which results in the arrangement of constituent parts of a phagosome within a cell and contributes to apoptotic cell clearance. Phagosome maturation begins with endocytosis and formation of the early phagosome and ends with the formation of the hybrid organelle, the phagolysosome.
GO:0090387 phagolysosome assembly involved in apoptotic cell clearance The process in which a phagosome, a vesicle formed by phagocytosis, fuses with a lysosome as a part of apoptotic cell clearance.

38 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
is_a GO:0090385 GO:0090389
part of GO:0090387 GO:0090389
part of GO:0090387 GO:0090389
is_a GO:0090385 GO:0090389
is_a GO:0048284 GO:0090389
part of GO:0070925 GO:0090389
part of GO:0080171 GO:0090389
is_a GO:0016050 GO:0090389
part of GO:0098657 GO:0090389
part of GO:0016043 GO:0090389
part of GO:0022607 GO:0090389
part of GO:0001845 GO:0090389
part of GO:0006810 GO:0090389
part of GO:0006897 GO:0090389
part of GO:0006996 GO:0090389
part of GO:0051234 GO:0090389
part of GO:0051179 GO:0090389
part of GO:0009987 GO:0090389
is_a GO:0090174 GO:0090389
part of GO:0007040 GO:0090389
part of GO:0008150 GO:0090389
is_a GO:0006996 GO:0090389
is_a GO:0009987 GO:0090389
part of GO:0006909 GO:0090389
part of GO:0016050 GO:0090389
part of GO:0016192 GO:0090389
is_a GO:0061025 GO:0090389
is_a GO:0061024 GO:0090389
part of GO:0071840 GO:0090389
part of GO:0090382 GO:0090389

0 Synonyms