WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

GO Term : GO:0097632 extrinsic component of phagophore assembly site membrane GO

Namespace  cellular_component Obsolete  false
Description  The component of the phagophore assembly site membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.

0 Cross References

1 Data Sets

Name URL
GO Annotation data set  

1 Ontology

Name
GO

1 Ontology Annotations

Annotation Extension Qualifier
  located_in

14 Parents

Identifier Name Description
GO:0005737 cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0005575 cellular_component A location, relative to cellular compartments and structures, occupied by a macromolecular machine. There are three types of cellular components described in the gene ontology: (1) the cellular anatomical entity where a gene product carries out a molecular function (e.g., plasma membrane, cytoskeleton) or membrane-enclosed compartments (e.g., mitochondrion); (2) virion components, where viral proteins act, and (3) the stable macromolecular complexes of which gene product are parts (e.g., the clathrin complex).
GO:0005622 intracellular anatomical structure A component of a cell contained within (but not including) the plasma membrane. In eukaryotes it includes the nucleus and cytoplasm.
GO:0110165 cellular anatomical structure A part of a cellular organism consisting of a material entity with granularity above the level of a protein complex but below that of an anatomical system. Note that cellular organisms exclude viruses.
GO:0043227 membrane-bounded organelle Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
GO:0043226 organelle Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane.
GO:0043229 intracellular organelle Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it and attached to it.
GO:0031090 organelle membrane A membrane that is one of the two lipid bilayers of an organelle envelope or the outermost membrane of single membrane bound organelle.
GO:0000407 phagophore assembly site Punctate structures proximal to the endoplasmic reticulum which are the sites where the Atg machinery assembles upon autophagy induction.
GO:0031312 extrinsic component of organelle membrane The component of an organelle membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.
GO:0019898 extrinsic component of membrane The component of a membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.
GO:0034045 phagophore assembly site membrane A cellular membrane associated with the phagophore assembly site.
GO:0097632 extrinsic component of phagophore assembly site membrane The component of the phagophore assembly site membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.

17 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
is_a GO:0031312 GO:0097632
part of GO:0034045 GO:0097632
is_a GO:0019898 GO:0097632
part of GO:0034045 GO:0097632
part of GO:0005575 GO:0097632
part of GO:0110165 GO:0097632
part of GO:0043229 GO:0097632
part of GO:0005622 GO:0097632
part of GO:0000407 GO:0097632
part of GO:0005737 GO:0097632
is_a GO:0005575 GO:0097632
is_a GO:0110165 GO:0097632
part of GO:0016020 GO:0097632
part of GO:0031090 GO:0097632
part of GO:0043227 GO:0097632
part of GO:0043226 GO:0097632
is_a GO:0019898 GO:0097632

3 Synonyms

Name Type
extrinsic to phagophore assembly site membrane synonym
extrinsic component of pre-autophagosomal structure membrane synonym
phagophore assembly site peripheral membrane synonym