WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

GO Term : GO:0099122 RNA polymerase II C-terminal domain binding GO

Namespace  molecular_function Obsolete  false
Description  Binding to the C-terminal domain (CTD) of the largest subunit of RNA polymerase II. The CTD is comprised of repeats of a heptapeptide with the consensus sequence YSPTSPS. The number of repeats varies with the species and a minimum number of repeats is required for RNAP II function.

0 Cross References

0 Data Sets

1 Ontology

Name
GO

0 Ontology Annotations

10 Parents

Identifier Name Description
GO:0003674 molecular_function A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs.
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO:0005515 protein binding Binding to a protein.
GO:0043175 RNA polymerase core enzyme binding Binding to an RNA polymerase core enzyme, containing a specific subunit composition defined as the core enzyme.
GO:0000993 RNA polymerase II complex binding Binding to an RNA polymerase II core enzyme, a multisubunit eukaryotic nuclear RNA polymerase typically composed of twelve subunits.
GO:0001099 basal RNA polymerase II transcription machinery binding Binding to a component of the basal transcription machinery for RNA polymerase II which is composed of the RNA polymerase II core enzyme, a multisubunit eukaryotic nuclear RNA polymerase typically composed of twelve subunits, and the basal RNA polymerase II transcription factors, the minimal set of factors required for formation of the preinitiation complex (PIC) by the RNA polymerase.
GO:0001098 basal transcription machinery binding Binding to a component of the basal transcription machinery which is composed of the RNA polymerase core enzyme and the basal transcription factor(s), the minimal set of factors required for formation of the preinitiation complex (PIC) by the RNA polymerase.
GO:0019899 enzyme binding Binding to an enzyme, a protein with catalytic activity.
GO:0070063 RNA polymerase binding Binding to an RNA polymerase molecule or complex.
GO:0099122 RNA polymerase II C-terminal domain binding Binding to the C-terminal domain (CTD) of the largest subunit of RNA polymerase II. The CTD is comprised of repeats of a heptapeptide with the consensus sequence YSPTSPS. The number of repeats varies with the species and a minimum number of repeats is required for RNAP II function.

10 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
is_a GO:0000993 GO:0099122
is_a GO:0001098 GO:0099122
is_a GO:0005488 GO:0099122
is_a GO:0019899 GO:0099122
is_a GO:0003674 GO:0099122
is_a GO:0001099 GO:0099122
is_a GO:0043175 GO:0099122
is_a GO:0070063 GO:0099122
is_a GO:0005515 GO:0099122
is_a GO:0099122 GO:1990269

1 Synonyms

Name Type
RNAP II C-terminal binding synonym