WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

GO Term : GO:1990269 RNA polymerase II C-terminal domain phosphoserine binding GO

Namespace  molecular_function Obsolete  false
Description  Binding to phosphorylated serine residues in the C-terminal domain of RNA polymerase II.

0 Cross References

1 Data Sets

Name URL
GO Annotation data set  

1 Ontology

Name
GO

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables

14 Parents

Identifier Name Description
GO:0003674 molecular_function A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs.
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO:0005515 protein binding Binding to a protein.
GO:0043175 RNA polymerase core enzyme binding Binding to an RNA polymerase core enzyme, containing a specific subunit composition defined as the core enzyme.
GO:0000993 RNA polymerase II complex binding Binding to an RNA polymerase II core enzyme, a multisubunit eukaryotic nuclear RNA polymerase typically composed of twelve subunits.
GO:0001099 basal RNA polymerase II transcription machinery binding Binding to a component of the basal transcription machinery for RNA polymerase II which is composed of the RNA polymerase II core enzyme, a multisubunit eukaryotic nuclear RNA polymerase typically composed of twelve subunits, and the basal RNA polymerase II transcription factors, the minimal set of factors required for formation of the preinitiation complex (PIC) by the RNA polymerase.
GO:0001098 basal transcription machinery binding Binding to a component of the basal transcription machinery which is composed of the RNA polymerase core enzyme and the basal transcription factor(s), the minimal set of factors required for formation of the preinitiation complex (PIC) by the RNA polymerase.
GO:0019899 enzyme binding Binding to an enzyme, a protein with catalytic activity.
GO:0070063 RNA polymerase binding Binding to an RNA polymerase molecule or complex.
GO:0045309 protein phosphorylated amino acid binding Binding to a phosphorylated amino acid residue within a protein.
GO:0051219 phosphoprotein binding Binding to a phosphorylated protein.
GO:0050815 phosphoserine residue binding Binding to a phosphorylated serine residue within a protein.
GO:0099122 RNA polymerase II C-terminal domain binding Binding to the C-terminal domain (CTD) of the largest subunit of RNA polymerase II. The CTD is comprised of repeats of a heptapeptide with the consensus sequence YSPTSPS. The number of repeats varies with the species and a minimum number of repeats is required for RNAP II function.
GO:1990269 RNA polymerase II C-terminal domain phosphoserine binding Binding to phosphorylated serine residues in the C-terminal domain of RNA polymerase II.

13 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
is_a GO:0050815 GO:1990269
is_a GO:0099122 GO:1990269
is_a GO:0043175 GO:1990269
is_a GO:0001098 GO:1990269
is_a GO:0019899 GO:1990269
is_a GO:0001099 GO:1990269
is_a GO:0005488 GO:1990269
is_a GO:0003674 GO:1990269
is_a GO:0005515 GO:1990269
is_a GO:0070063 GO:1990269
is_a GO:0000993 GO:1990269
is_a GO:0045309 GO:1990269
is_a GO:0051219 GO:1990269

2 Synonyms

Name Type
RNAP II C-terminal domain phosphoserine binding synonym
RNA Pol II C-terminal domain phosphoserine binding synonym