WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

GO Term : GO:0140849 ATP-dependent H2AZ histone chaperone activity GO

Namespace  molecular_function Obsolete  false
Description  A histone chaperone that mediates the exchange of histone H2A-H2B dimer and histone H2AZ-H2B dimers in a nucleosome, driven by ATP hydrolysis. Some chaperones insert H2AZ-H2B dimers and remove H2A-H2B, while others do the opposite.

0 Cross References

0 Data Sets

1 Ontology

Name
GO

0 Ontology Annotations

30 Parents

Identifier Name Description
GO:0009987 cellular process Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
GO:0008150 biological_process A biological process is the execution of a genetically-encoded biological module or program. It consists of all the steps required to achieve the specific biological objective of the module. A biological process is accomplished by a particular set of molecular functions carried out by specific gene products (or macromolecular complexes), often in a highly regulated manner and in a particular temporal sequence.
GO:0071840 cellular component organization or biogenesis A process that results in the biosynthesis of constituent macromolecules, assembly, arrangement of constituent parts, or disassembly of a cellular component.
GO:0016043 cellular component organization A process that results in the assembly, arrangement of constituent parts, or disassembly of a cellular component.
GO:0003674 molecular_function A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) performs.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0140640 catalytic activity, acting on a nucleic acid Catalytic activity that acts to modify a nucleic acid.
GO:0140097 catalytic activity, acting on DNA Catalytic activity that acts to modify DNA.
GO:0016787 hydrolase activity Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc.
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO:0140104 molecular carrier activity Directly binding to a specific ion or molecule and delivering it either to an acceptor molecule or to a specific location.
GO:0016817 hydrolase activity, acting on acid anhydrides Catalysis of the hydrolysis of any acid anhydride.
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides Catalysis of the hydrolysis of any acid anhydride which contains phosphorus.
GO:0140096 catalytic activity, acting on a protein Catalytic activity that acts to modify a protein.
GO:0016462 pyrophosphatase activity Catalysis of the hydrolysis of a pyrophosphate bond (diphosphate bond) between two phosphate groups.
GO:0017111 ribonucleoside triphosphate phosphatase activity Catalysis of the reaction: a ribonucleoside triphosphate + H2O = a ribonucleoside diphosphate + H+ + phosphate.
GO:0016887 ATP hydrolysis activity Catalysis of the reaction: ATP + H2O = ADP + H+ phosphate. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient.
GO:0140657 ATP-dependent activity A molecular function characterized by the coupling of ATP hydrolysis to other steps of a reaction mechanism to make the reaction energetically favorable, for example to catalyze a reaction or drive transport against a concentration gradient.
GO:0003676 nucleic acid binding Binding to a nucleic acid.
GO:0005515 protein binding Binding to a protein.
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0006325 chromatin organization The assembly or remodeling of chromatin composed of DNA complexed with histones, other associated proteins, and sometimes RNA.
GO:0006338 chromatin remodeling A dynamic process of chromatin reorganization resulting in changes to chromatin structure. These changes allow DNA metabolic processes such as transcriptional regulation, DNA recombination, DNA repair, and DNA replication.
GO:0140713 histone chaperone activity Binding to and carrying a histone or a histone complex to unload or deposit it as a nucleosome. The histone can be newly synthesized or result from nucleosome disassembly (either spontaneously, or by a histone chaperone).
GO:0140597 protein carrier chaperone Binding to and carrying a protein between two different cellular components by moving along with the target protein.
GO:0042393 histone binding Binding to a histone, any of a group of water-soluble proteins found in association with the DNA of eukaryotic or archaeal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in gene regulation and DNA replication. They may be chemically modified (methylated, acetlyated and others) to regulate gene transcription.
GO:0008094 ATP-dependent activity, acting on DNA Catalytic activity that acts to modify DNA, driven by ATP hydrolysis.
GO:0140658 ATP-dependent chromatin remodeler activity An activity, driven by ATP hydrolysis, that modulates the contacts between histones and DNA, resulting in a change in chromosome architecture within the nucleosomal array, leading to chromatin remodeling.
GO:0140674 ATP-dependent histone chaperone activity Binding to and carrying a histone or a histone complex to unload or deposit it as a nucleosome, driven by ATP hydrolysis.
GO:0140849 ATP-dependent H2AZ histone chaperone activity A histone chaperone that mediates the exchange of histone H2A-H2B dimer and histone H2AZ-H2B dimers in a nucleosome, driven by ATP hydrolysis. Some chaperones insert H2AZ-H2B dimers and remove H2A-H2B, while others do the opposite.

31 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
is_a GO:0140674 GO:0140849
part of GO:0006325 GO:0140849
is_a GO:0008094 GO:0140849
has part GO:0016817 GO:0140849
is_a GO:0140096 GO:0140849
has part GO:0016818 GO:0140849
is_a GO:0140097 GO:0140849
part of GO:0016043 GO:0140849
is_a GO:0140640 GO:0140849
has part GO:0003674 GO:0140849
part of GO:0071840 GO:0140849
is_a GO:0140104 GO:0140849
has part GO:0003676 GO:0140849
has part GO:0003677 GO:0140849
has part GO:0005515 GO:0140849
has part GO:0017111 GO:0140849
has part GO:0016462 GO:0140849
part of GO:0009987 GO:0140849
is_a GO:0003824 GO:0140849
has part GO:0016787 GO:0140849
has part GO:0016887 GO:0140849
has part GO:0042393 GO:0140849
part of GO:0008150 GO:0140849
is_a GO:0140597 GO:0140849
has part GO:0005488 GO:0140849
is_a GO:0140657 GO:0140849
is_a GO:0140713 GO:0140849
is_a GO:0140658 GO:0140849
part of GO:0006338 GO:0140849
is_a GO:0003674 GO:0140849

2 Synonyms

Name Type
ATP-dependent H2A.Z histone chaperone activity synonym
H2AZ histone exchange activity synonym