WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  In WT animals, SID-5 was detected by immunohistochemistry in somatic cell types including intestine, muscle, neurons, somatic gonad, and embryos, but not in the germline. Transcriptional and translational sid-5 GFP reporters were expressed in most, if not all, somatic tissues. The translational fusion protein appeared to associate with membranes in the cytoplasm of intestinal cells. Primary Identifier  Expr10555
Subcellular Localization  SID-5 associates, at least partially, with late endosomes.

6 Anatomy Terms

Definition Name Synonym Primary Identifier
A chain of very large cuboidal cells forming a wide central lumen in which food arrives from the posterior pharynx, is digested, and from which waste products proceed to the rectum. Intestinal rings form in groups of two and four cells surrounding the common lumen; thus the epithelium is only one cell deep at any point, with neighboring cells firmly secured to their neighbors by apical adherens junctions. These cells have very large nuclei and many large vacuoles, yolk granules, and other inclusions; the latter increase in number and electron density as the animal ages. intestine gut WBbt:0005772
Major cell type of nervous tissue, specialized for transmission of information in the form of patterns of impulses. neuron neurone WBbt:0003679
Contractile cell that makes up muscle tissue. muscle cell   WBbt:0003675
The components of the gonad that are separate from the germline proper. In hermaphrodite, these include five tissues which are all derived from the somatic primordium : the distal tip cells, the gonadal sheath, the spermatheca, the spermatheca-uterine valve (sp-ut) and the uterus. somatic gonad somatic germline WBbt:0005785
Nucleated cell which has a diploid set of chromosomes. somatic cell FMA:72300 WBbt:0008378
cell that exists in and is part of an embryo. embryonic cell   WBbt:0007028

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017445 sid-5 F14B8.2 Caenorhabditis elegans

0 Life Stages