WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Life Stage :

Definition  The C. elegans life stage spanning 145-150 min after first cleavage at 20 Centigrade. Contains 88 cells. Primary Identifier  WBls:0000012
Public Name  88-cell embryo Ce

88 Anatomy Terms

Definition Name Synonym Primary Identifier
embryonic cell ABaraaap   WBbt:0005861
embryonic cell ABaraapa   WBbt:0005853
embryonic cell ABprpapp   WBbt:0005852
embryonic cell ABplaapp   WBbt:0005896
embryonic cell ABalppaa   WBbt:0005944
embryonic cell ABalpaap   WBbt:0005934
embryonic cell ABplpapa   WBbt:0006087
embryonic cell ABplpaap   WBbt:0006077
embryonic cell ABalpppp   WBbt:0006089
embryonic cell ABalppap   WBbt:0006112
embryonic cell ABaraapp   WBbt:0006153
embryonic cell ABprpaaa   WBbt:0006167
embryonic cell ABprpaap   WBbt:0006253
embryonic cell ABprpapa   WBbt:0006259
embryonic cell ABpraapa   WBbt:0006302
embryonic cell ABplpaaa   WBbt:0006315
embryonic cell ABpraapp   WBbt:0006335
embryonic cell ABaraaaa   WBbt:0006360
embryonic cell ABpraaaa   WBbt:0006442
embryonic cell ABplpapp   WBbt:0006420
embryonic cell ABplaaap   WBbt:0006478
embryonic cell Da   WBbt:0006512
embryonic cell ABpraaap   WBbt:0006534
embryonic cell ABalpapa   WBbt:0006573
embryonic cell ABalpaaa   WBbt:0006557
embryonic cell ABplaaaa   WBbt:0006584
embryonic cell ABplaapa   WBbt:0006619
embryonic cell ABalpapp   WBbt:0006607
embryonic cell ABalpppa   WBbt:0006649
embryonic cell Dp   WBbt:0006718

2 Contained In

Remark Definition Other Name Public Name Primary Identifier
  The C. elegans life stage spanning 100-290min after first cleavage at 20 Centigrade. Proliferate from 28 cells to 421 cells. Referring to the whole period of gastrulation. gastrulating embryo Ce WBls:0000010
  A C. elegans life stage that occurs during the gastrulating embryo life stage C. elegans life stage occurring during gastrulation WBls:0000814

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
90 cell embryo(author) = 88-cell embryo(curator). CeMyoD :Basic Helix-loop-helix transcription factor. Related to the vertebrate MyoD family that is involved in the regulation of striated muscle cell fate.Vertebrate Homologs: Mammalian factors MyoD, MRF-4, Myf-5, myogenin.Invertebrate Homologs: Drosophila protein "Nautilus", sea urchin "SUM-1". Legacy Data: Author "Seydoux GC" "Krause MW". Date 1995-08. Function: Putative null mutation (cc450) of L. Chen and A.Fire suggests important role for CeMyoD in body wall muscle cell function and morphogenesis. CeMyoD is not required for bwm cell fate determination but is for proper bwm cell differentiation   Expr56 Antibody staining: Transient nuclear staining in early MS lineage identical to lacZ pattern. Stable nuclear expression begins in the 2 daughters of D at the ~90 cell stage, then C and MS lineages that give rise to body wall muscle cells (bwm). The lone AB bwm appears positive after born. At pretzel stage, nuclear staining in the 6 GLR cells. Staining persists throughout postembryonic development in bwm cells, including post-embryonically born bwm. lacZ reporter gene expression: Multiple constructs with multiple lines. Transient expression in 2 MS daughters and the 4 MS granddaughters. Stable expression begins at ~90 cell stage in two daughters of D. Then on in C, MS lineages that give rise to body wall muscle precursors. At pretzel stage, hlh-1 is also expressed in the 6 GLR cells. positive hybridisation to RNA (in _situ) same as lacZ pattern except RNA appears to go away at bean stage and reappear later in embryogenesis  

1 Followed By

Remark Definition Other Name Public Name Primary Identifier
  The C. elegans life stage spanning 155-165 min after first cleavage at 20 Centigrade. Contains 96 cells. 96-cell embryo Ce WBls:0000090

1 Preceded By

Remark Definition Other Name Public Name Primary Identifier
Levin M, Hashimshony T, Wagner F, Yanai I. Developmental milestones punctuate gene expression in the Caenorhabditis embryo. Dev Cell. 2012 May 15;22(5):1101-8. Epub 2012 May 3. PubMed PMID: 22560298. Supplementary table 1. Seventh cleavage of the AB lineage. Contains 86 cells. 86-cell embryo Ce WBls:0000088

0 Sub Stages