WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  A fosmid reporter construct, which contains more than 30 kb surrounding the ttx-3 locus and which rescues the AIY differentiation defect of ttx-3 mutant animals, mirrors the expression of a smaller, locus-restricted reporter construct described earlier (Altun-Gultekin et al., 2001) in the AIY, the AIA, the AIN and a previously uncharacterized neuronal pair in the pharyngeal nervous system. Based on position, morphology and colabeling with the NSM marker mgl-1::mCherry, the authors identified the pharyngeal neurons that express ttx-3 as the NSM neuron pair. There are also notable differences in the expression pattern of the fosmid reporter and the smaller reporters. First, expression in the AIN neurons is maintained throughout development with the fosmid reporter, whereas it is restricted to embryos with smaller reporters (Bertrand and Hobert, 2009). Second, the expression in amphid sensory neurons is markedly different. In larval and adult animals, the fosmid reporter is expressed in the ASK neuron class, whereas the smaller reporters are expressed in the ADL and ASI sensory neurons. Primary Identifier  Expr11460

10 Anatomy Terms

Definition Name Synonym Primary Identifier
Amphid interneuron AIYL lineage name: ABplpapaaap WBbt:0003963
Amphid interneuron AIYR lineage name: ABprpapaaap WBbt:0003961
Pharyngeal neurosecretory motorneuron, contain serotonin NSMR lineage name: ABaraapppaav WBbt:0004446
Pharyngeal neurosecretory motorneuron, contain serotonin NSML lineage name: ABaraapapaav WBbt:0004457
one member of Amphid neurons, single ciliated endings, probably chemo-sensory; project into ring via commissure from ventral ganglion, make diverse synaptic connections in ring neuropil ASKL lineage name: ABalpppapppa WBbt:0003884
one member of Amphid neurons, single ciliated endings, probably chemo-sensory; project into ring via commissure from ventral ganglion, make diverse synaptic connections in ring neuropil ASKR lineage name: ABpraaaapppa WBbt:0003883
Amphid interneuron AIAL lineage name: ABplppaappa WBbt:0003989
Amphid interneuron AIAR lineage name: ABprppaappa WBbt:0003987
Ring interneuron AINR lineage name: ABalaapaaar WBbt:0003965
Ring interneuron AINL lineage name: ABalaaaalal WBbt:0003967

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006654 ttx-3 C40H5.5 Caenorhabditis elegans

0 Life Stages