WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  In C. elegans hermaphrodites, nph-1::GFP expressed in the ciliated amphid neurons, the outer labial neurons, and the two phasmid neurons in the tail. In addition, early expression of nph-1::GFP in transgenic embryos was shown. The earliest point of observation during development was the 1.5-fold embryonic stage. In C. elegans males, nph-1::GFP expression in the head was detected in amphid neurons and in a second group of neurons that could not be assigned with certainty but that may be compatible with the male-specific CEM neurons. In the male tail, nph-1::GFP expression was found in the cloacal and lumbar ganglia. GFP expression in the lumbar ganglia was interpreted to be in the ninth sensory ray neuron. Expression in the cloacal ganglia could not be assigned with certainty. Primary Identifier  Expr3719

12 Anatomy Terms

Definition Name Synonym Primary Identifier
neuron of phasmid sensillum phasmid neuron   WBbt:0006753
neuron of the amphid sensillum amphid neuron amphid sensory neuron WBbt:0005394
Male specific cephalic neurons (programmed cell death in hermaphrodite embryo) open to outside, possible function in male chemotaxis toward hermaphrodite. CEMDL lineage name: ABplaaaaaap WBbt:0004945
Male specific cephalic neurons (programmed cell death in hermaphrodite embryo) open to outside, possible function in male chemotaxis toward hermaphrodite. CEMDR lineage name: ABarpapaaap WBbt:0004943
Male specific cephalic neurons (programmed cell death in hermaphrodite embryo) open to outside, possible function in male chemotaxis toward hermaphrodite. CEMVL lineage name: ABplpaapapp WBbt:0004941
Post-embryonic cell of pedigree TL.appapapa, male sensory rays, neuron, darkly staining tip, open to outside. R9BL lineage name: TL.appapapa WBbt:0003968
Male sensory rays, neuron, darkly staining tip, open to outside R9BR lineage name: TR.appapapa WBbt:0003966
Male specific cephalic neurons (programmed cell death in hermaphrodite embryo) open to outside, possible function in male chemotaxis toward hermaphrodite. CEMVR lineage name: ABprpaapapp WBbt:0004939
neuron type, set of six neurons in the outer labial sensillum. outer labial neuron OL neuron WBbt:0006801
Male sensory rays, neuron, striated rootlet R9AR lineage name: TR.appapaaa WBbt:0003970
Male sensory rays, neuron, striated rootlet R9AL lineage name: TL.appapaaa WBbt:0003971
A pair of neuronal ganglia in the adult male tail, lying on either side of the proctodeum, but not found in the hermaphrodite. cloacal ganglion   WBbt:0005348

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010898 nphp-1 M28.7 Caenorhabditis elegans

9 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041
  The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch. L3 larva Ce WBls:0000035
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024
  The C. elegans life stage spanning 620-800min(hatch) after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. A stage after elongation is over. The last stage of embryogenesis. Also called pre-hatched embryo, late embryo or morphogenetic embryo. fully-elongated embryo Ce WBls:0000021
  The C. elegans life stage spanning 460-520min after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. The shape of embryo is elongated and double fold. A stage between 1.5-fold embryo and 3-fold embryo. 2-fold embryo Ce WBls:0000019
  The C. elegans life stage spanning 520-620min after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. The shape of embryo is elongated and tripple fold. A stage between 2-fold embryo and fully-elongated embryo. Also called pretzel embryo or pretzel stage. 3-fold embryo Ce WBls:0000020
  The C. elegans life stage spanning 420-460min after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. The shape of embryo is elongated and fold back 50%. A stage between comma embryo and 2-fold embryo. 1.5-fold embryo Ce WBls:0000018