WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Primary Identifier  Expr8800 Remark  Picture: Figure 2; Figure S2, S4.
Subcellular Localization  mCherry-RME-8 colocalized extensively with GFP-SNX-1 in several different tissues, including the intestine, the hypodermis, and coelomocytes. mCherry-SNX-1 colocalized well with early endosomal markers GFP-EEA-1 and GFP-RAB-5 in several tissues of living animals. GFP-RME-8 also colocalized well with early endosome markers. In the intestine, the Golgi ministacks are similar in size to early endosome. there were very little direct overlap of mCherry-SNX-1 or mCherry-RME-8 with Golgi marker Mannosidase (MANS)-GFP.

3 Anatomy Terms

Definition Name Synonym Primary Identifier
A chain of very large cuboidal cells forming a wide central lumen in which food arrives from the posterior pharynx, is digested, and from which waste products proceed to the rectum. Intestinal rings form in groups of two and four cells surrounding the common lumen; thus the epithelium is only one cell deep at any point, with neighboring cells firmly secured to their neighbors by apical adherens junctions. These cells have very large nuclei and many large vacuoles, yolk granules, and other inclusions; the latter increase in number and electron density as the animal ages. intestine gut WBbt:0005772
Epidermal layer. hypodermis epidermis WBbt:0005733
A free-floating spherical cell lying in the pseudocoelomic cavity of larvae and adult C. elegans which can endocytose many compounds, possibly for immune surveillance. There are six coelomocytes in adult hermaphrodites, and they display prominent cytoplasmic inclusions and vacuoles. coelomocyte   WBbt:0005751

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004927 snx-1 C05D9.1 Caenorhabditis elegans

0 Life Stages