WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  Imaging this strain revealed significant differences in SNT-1 isoform expression and localization. The SNT-1A isoform is abundantly expressed in most neurons, and the distribution of this isoform is synaptic, resembling that of the endogenous SNT-1 (see Expr334). In contrast, the SNT-1B isoform is expressed at lower levels and in fewer neurons than SNT-1A. Many neurons express both SNT-1A and -1B, although the relative amount of each isoform varies greatly between individual cells, and some neurons appear to express only the SNT-1A isoform. Strong exclusive expression of the SNT-1B isoform was also observed in a single ventral cell located just anterior to the terminal bulb of the pharynx; which might be the excretory duct cell. In addition, SNT-1B is strongly expressed in a cluster of tail neurons, including DVB. Primary Identifier  Expr8300
Remark  Picture: Figure 3. Reporter Gene  [snt-1::SNT-1A::CFP; snt-1::SNT-1B::YFP]. SNT-1A::CFP and SNT-1B::YFP transgenes were integrated separately, and a strain containing both integrated transgenes was constructed.

3 Anatomy Terms

Definition Name Synonym Primary Identifier
neuron with its cell body situated in the tail, posterior to rectum. tail neuron   WBbt:0006759
The extracellular sinus formed by the excretory duct and pore cells. Excretory duct   WBbt:0005777
Neuron class of one ring interneuron, cell body in dorsorectal ganglion, inervates rectal muscles. DVB lineage name: K.p WBbt:0004822

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004921 snt-1 F31E8.2 Caenorhabditis elegans

0 Life Stages