WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  Both sexes bearing a vab-3::gfp transgene exhibit GFP expression in neuronal, and occasionally epidermal cell types in the head. Neuronal transcription begins after gastrulation and persists throughout the life of the animals. In addition, vab-3::gfp displays sex-specific expression patterns, such as in the distal tip cells (DTCs) of L4 hermaphrodites and the B.a and Y.p sensory organ precursors in males. vab-3::gfp transgene is not expressed in any ray lineages. vab-3::gfp expression is visible in the B.a and Y.p cells beginning in early L2. Expression levels among individual cell types derived from these precursors are not appreciably different through mid L3. In the B.a lineage, GFP persists through larval development. Expression diminishes during late L4 tail morphogenesis, and is absent in adults. Expression in the Y.p lineage shows a distinct temporal pattern. GFP in the Y.p lineage diminishes from mid L2 through mid L3, at which time only the eight B.a descendants exhibit expression. Primary Identifier  Expr8148
Remark  Picture: Figure 1.

4 Anatomy Terms

Definition Name Synonym Primary Identifier
Anterior distal tip cell, inhibit meiosis in neighbouring germ cells, lead gonad during morphogenesis, herm gonad anterior distal tip cell gon herm dtc A WBbt:0004520
Posterior distal tip cell, inhibit meiosis in neighbouring germ cells, lead gonad during morphogenesis, herm gonad posterior distal tip cell gon herm dtc P WBbt:0004506
cell, anterior daughter of B cell in male B.a   WBbt:0006985
post-embryonic cell of pedigree Y.p Y.p   WBbt:0007573

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006870 vab-3 F14F3.1 Caenorhabditis elegans

10 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041
  The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch. L3 larva Ce WBls:0000035
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024
  The C. elegans life stage spanning 620-800min(hatch) after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. A stage after elongation is over. The last stage of embryogenesis. Also called pre-hatched embryo, late embryo or morphogenetic embryo. fully-elongated embryo Ce WBls:0000021
  The C. elegans life stage spanning 350-620min after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. The stage that embryo starts elongation until elongation is over. elongating embryo Ce WBls:0000015
  The C. elegans life stage spanning 290-350min after first cleavage at 20 Centigrade. Proliferate from 421 cells to 560 cells. The stage when embryo just finished gastrulation and is enclosing. enclosing embryo Ce WBls:0000013
  The C. elegans life stage spanning 100-290min after first cleavage at 20 Centigrade. Proliferate from 28 cells to 421 cells. Referring to the whole period of gastrulation. gastrulating embryo Ce WBls:0000010
  The C. elegans life stage spanning 0-350min after first cleavage at 20 Centigrade. Proliferate from 1 cell to 560 cells. From start of first cleavage until cleavage is over. proliferating embryo Ce WBls:0000004