WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Primary Identifier  Expr8133 Remark  Picture: Figure 7, Figure S2.
Subcellular Localization  CAR-1 is an Scd6 homolog that reside in a variety of RNA regulatory particles, including P bodies, P granules, Drosophila neuronal granules, and mammalian stress granules. In C. elegans, primarily two types of CAR-1 foci exist: those with P body proteins, such as DCAP-1, and those with P granule protein PGL-1. Significant overlap of LARP-1 and CAR-1 were observed in the mid-pachytene region. Since LARP-1 is excluded from P granules (see Expr8132, authors reasoned that the LARP-1/CAR-1 foci were P bodies. Moreover, as with DCAP-1 and LARP-1 colocalization, only a subset of CAR-1 and LARP-1 foci colocalized. These results confirm that LARP-1 accumulates in a subset of germline P bodies. Wild-type and larp-1(0) germ lines were costained with aLARP-1 and a polyclonal antibody directed against DCAP-1. DCAP-1 was predominately cytoplasmic and accumulated in irregularly shaped puncta. DCAP-1 was most abundant in the mitotic region, mid- pachytene region, and distal oocytes and least abundant in the transition zone, early pachytene region, and most proximal oocytes. LARP-1 and DCAP-1 overlapped throughout the distal germ line and colocalized in perinuclear foc. However, not all DCAP-1 foci stained positively for aLARP-1 and not all LARP-1 foci were positive for aDCAP-1. These results indicate that LARP-1/DCAP-1 foci define a unique subset of P bodies in the germ line.

1 Anatomy Terms

Definition Name Synonym Primary Identifier
cell line which early in development becomes differentiated from the remaining somatic cell line, and alone has the potential to undergo meiosis and form gametes. germ line germline WBbt:0005784

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020097 larp-1 R144.7 Caenorhabditis elegans

0 Life Stages