WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  Consistent with previous publications, GFP::NRDE-3 (bombardment) localizes to the nuclei of somatic cells beginning around 100-cell stage of embryogenesis. No expression can be detected in germ cells or early embryos [Expr16524]. In contrast, GFP::NRDE-3 (CRISPR) is visible in nuclei beginning in late pachytene of the germline and continues to be expressed in oocytes and in all stages of embryogenesis. This discrepancy in expression between the transgenic strain constructed by bombardment and the CRISPR strain suggests that GFP::NRDE-3 (bombardment) may be silenced in the germline and early embryos. In the CRISPR line, it is also expressed in somatic seam cells in L1 larvae. Primary Identifier  Expr16525

2 Anatomy Terms

Definition Name Synonym Primary Identifier
a group of hypodermal cells that lie along the apical midline of the hypodermis, at the extreme left and right sides between nose and tail seam cell lateral hypodermis WBbt:0005753
a cell, of either sex, directly concerned in the production of a new organism. germ cell   WBbt:0006796

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019862 nrde-3 R04A9.2 Caenorhabditis elegans

2 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024
  The whole period of embryogenesis in the nematode Caenorhabditis elegans, from the formation of an egg until hatching. embryo Ce WBls:0000003