WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  We observed low levels of Pina-1::GFP expression in GABAergic motor neurons of both L1 and L4 animals. At the L1 stage, where only DD GABAergic neurons are present, we noted dim fluorescence in DD cell bodies that was obscured by comparatively high levels of Pina-1::GFP epidermal expression. At the L4 stage, somatic fluorescence in GABAergic motor neurons remained dim, but was more clearly discernible in comparison with L1, likely due to decreased Pina-1::GFP expression in the epidermis of L4 stage animals. We noted consistent low levels of expression across both VD and DD GABAergic neurons. We also noted stronger labeling of additional ventral cord motor neurons that were not labeled by the Punc-47::mCherry reporter, suggesting expression of ina-1 in other motor neuron classes. To address this possibility, we generated a transgenic strain co-expressing the Pina-1::GFP reporter with the cholinergic marker Pacr-2::mCherry. Overall, we noted that Pina-1::GFP fluorescence was stronger in cholinergic motor neurons compared with GABAergic motor neurons, and was expressed in only a subset of cholinergic motor neurons at both L1 and L4 stages. At the L4 stage, Pina-1::GFP fluorescence was most consistently observed labeling the B-class cholinergic motor neurons. Primary Identifier  Expr16238

22 Anatomy Terms

Definition Name Synonym Primary Identifier
Epidermal layer. hypodermis epidermis WBbt:0005733
neuron that uses GABA as a vesicular neurotransmitter. GABAergic neuron   WBbt:0005190
neuron that uses vesicular acetylcholine as a neurotransmitter. cholinergic neuron ACh neuron WBbt:0006840
Ventral cord motor neuron, innervates ventral body muscles, probably reciprocal inhibitor VD13 lineage name: P12.app WBbt:0004585
Ventral cord motor neurons, reciprocal inhibitors, chnage synaptic pattern during postembryonic development DD6 lineage name: ABprppapppp WBbt:0004824
Ventral cord motor neurons, reciprocal inhibitors, chnage synaptic pattern during postembryonic development DD2 lineage name: ABprppappap WBbt:0004838
Ventral cord motor neuron, innervates ventral body muscles, probably reciprocal inhibitor VD12 lineage name: P11.app WBbt:0004587
Ventral cord motor neuron, innervates ventral body muscles, probably reciprocal inhibitor VD11 lineage name: P10.app WBbt:0004589
Ventral cord motor neuron, innervates ventral body muscles, probably reciprocal inhibitor VD10 lineage name: P9.app WBbt:0004591
Ventral cord motor neuron, innervates ventral body muscles, probably reciprocal inhibitor VD9 lineage name: P8.app WBbt:0004593
Ventral cord motor neuron, innervates ventral body muscles, probably reciprocal inhibitor VD7 lineage name: P6.app WBbt:0004598
Ventral cord motor neuron, innervates ventral body muscles, probably reciprocal inhibitor VD6 lineage name: P5.app WBbt:0004599
Ventral cord motor neuron, innervates ventral body muscles, probably reciprocal inhibitor VD8 lineage name: P7.app WBbt:0004597
Ventral cord motor neuron, innervates ventral body muscles, probably reciprocal inhibitor VD4 lineage name: P3.app WBbt:0004603
Ventral cord motor neuron, innervates ventral body muscles, probably reciprocal inhibitor VD5 lineage name: P4.app WBbt:0004601
Ventral cord motor neuron, innervates ventral body muscles, probably reciprocal inhibitor VD2 lineage name: P1.app WBbt:0004607
Ventral cord motor neuron, innervates ventral body muscles, probably reciprocal inhibitor VD3 lineage name: P2.app WBbt:0004605
Ventral cord motor neuron, innervates ventral body muscles, probably reciprocal inhibitor VD1 lineage name: W.pp WBbt:0004609
Ventral cord motor neurons, reciprocal inhibitors, chnage synaptic pattern during postembryonic development DD4 lineage name: ABprppapppa WBbt:0004826
Ventral cord motor neurons, reciprocal inhibitors, chnage synaptic pattern during postembryonic development DD5 lineage name: ABplppapppp WBbt:0004825
Ventral cord motor neurons, reciprocal inhibitors, chnage synaptic pattern during postembryonic development DD3 lineage name: ABplppapppa WBbt:0004837
Ventral cord motor neurons, reciprocal inhibitors, chnage synaptic pattern during postembryonic development DD1 lineage name: ABplppappap WBbt:0004839

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002081 ina-1 F54G8.3 Caenorhabditis elegans

2 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024