WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  Expression of PAT-9::GFP was first detected in the early embryo; by the 2-fold stage of development PAT-9::GFP localized exclusively to the body wall muscle nuclei in each body wall muscle quadrant. PAT-9::GFP continued to be expressed in the cell nuclei of larvae and adults, and it became no longer exclusive to body wall muscle. The PAT-9 immunostaining of N2 animals showed a similar expression pattern to that seen with the pat-9 transgene. Endogenous PAT-9 was expressedfrom very early stages and throughout all developmental stages, and in adults endogenous PAT-9 was predominantly nuclear and appeared excluded from the DAPI- poor nucleoli. In addition to expression in body wall muscle, PAT-9 was observed in the germ cell-like nuclei of the cytoplasmic syncytium of the C. elegans gonad, where most nuclei are arrested in meiosis. Primary Identifier  Expr10031
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2 Anatomy Terms

Definition Name Synonym Primary Identifier
Longitudinal bands of muscle cells surrounding animal body, with one band running in each quadrant of the body, regulated contraction and relaxation of these muscles cause locomotion. body wall musculature body muscle WBbt:0005813
organ producing either sperm or ova. gonad   WBbt:0005175

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003933 pat-9 T27B1.2 Caenorhabditis elegans

6 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041
  The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch. L3 larva Ce WBls:0000035
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024
  The whole period of embryogenesis in the nematode Caenorhabditis elegans, from the formation of an egg until hatching. embryo Ce WBls:0000003