WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  Expressed in IL1, 2 head neurons, VNC, PVD, 3 tail neurons, precomma embryos. Primary Identifier  Expr1705
Remark  Transgenic lines were generated by coinjection of the nlp::gfp construct (5070 ng/ul) and lin-15 rescue construct (pJM24,100 ng/ul) into lin-15(n765ts) animals. At least two independent transgenic lines were analyzed for each nlp gene; 510 animals were scored per line. 1,1'-Dioctadecyl-3,3,3',3 -tetramethylindodicarbocyanine perchlorate (Molecular Probes) was used to stain amphid and phasmid neurons to facilitate identification.
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11 Anatomy Terms

Definition Name Synonym Primary Identifier
neuron with cell body associated with the ventral nerve cord. ventral cord neuron ventral cord motoneuron WBbt:0005300
neuron with its cell body situated in the head, excluding the pharynx. head neuron   WBbt:0006751
neuron with its cell body situated in the tail, posterior to rectum. tail neuron   WBbt:0006759
Inner labial neuron IL1VL lineage name: ABalppapppaa WBbt:0004549
Inner labial neuron IL1VR lineage name: ABarapppppaa WBbt:0004547
Inner labial neuron IL1DL lineage name: ABalapappaaa WBbt:0004738
Inner labial neuron IL1DR lineage name: ABalappppaaa WBbt:0004737
Inner labial neuron IL1L lineage name: ABalapaappaa WBbt:0004553
Inner labial neuron IL1R lineage name: ABalaappppaa WBbt:0004551
Neuron, lateral process adjacent to excretory canal PVDR lineage name: V5R.paapa WBbt:0004088
Neuron, lateral process adjacent to excretory canal PVDL lineage name: V5L.paapa WBbt:0004090

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003749 nlp-11 ZK1320.10 Caenorhabditis elegans

4 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The C. elegans life stage spanning 290-350min after first cleavage at 20 Centigrade. Proliferate from 421 cells to 560 cells. The stage when embryo just finished gastrulation and is enclosing. enclosing embryo Ce WBls:0000013
  The C. elegans life stage spanning 100-290min after first cleavage at 20 Centigrade. Proliferate from 28 cells to 421 cells. Referring to the whole period of gastrulation. gastrulating embryo Ce WBls:0000010
  The C. elegans life stage spanning 0-100min after first cleavage at 20 Centigrade. Proliferate from 1 cell to 28 cells. From first cleavage until the start of gastrulation. blastula embryo Ce WBls:0000005
  The C. elegans life stage spanning 350-390min after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. Emrbyo elongation started but have not formed comma shape yet. The shape of embryo looks like a lima bean. A stage right before comma embryo. Also called lima embryo or lima bean stage. bean embryo Ce WBls:0000016