WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Anatomy Term :

Definition  inner labial socket cell. Name  IL socket cell
Primary Identifier  WBbt:0008418

6 Children

Definition Name Synonym Primary Identifier
Inner labial socket ILsoDL lineage name: ABplaapaaap WBbt:0004521
Inner labial socket ILsoDR lineage name: ABpraapaaap WBbt:0004519
Inner labial socket ILsoL lineage name: ABalaaapall WBbt:0004518
Inner labial socket ILsoR lineage name: ABalaaapprr WBbt:0004517
Inner labial socket ILsoVL lineage name: ABalppapapp WBbt:0004503
Inner labial socket ILsoVR lineage name: ABarapppapp WBbt:0004501

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Top 300 transcripts enriched in ADE sheath cell, ADE socket cell, amphid sheath cell, amphid socket cell, cephalic sheath cell, CEP socket cell, IL sheath cell, IL socket cell, OL sheath cell, OL socket cell, PDE sheath cell, PDE socket cell, phasmid sheath cell, phasmid socket cell according to single cell RNAseq. Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. WBPaper00061340:Glia

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
    Expr11704 Expression of the transcriptional fusion Ptop-1::gfp was not detected in early embryonic cells due to maternal germline silencing of the multi-copy transgenic gene. The GFP expression, however, was observed in most cells at the late embryonic stage and decreased with larval development. In the larval stages, GFP expression was predominantly present in the neuronal system, including sensory neurons (ILso, URX, RIC, IL1/IL2, AIY/AIM and RIG/RIF), motor neurons (VC4, VC5, HSN, PVD and PVM) of hermaphrodites and tail neurons (SPD and SPV/SPC) of males. The expression of the transcriptional fusion Ptop-1::gfp was strong in DTCs during the L3-L4 stage when gonad migration proceeds.  
    Expr12764 ARGK-1 is expressed in inner and outer labial socket cells. In addition, GFP signal was observed in additional cells, including the intestine.  
    Expr9197 No expression from the transgene is seen in embryonic stages. GFP expression is detected in glial cells associated with amphid, phasmid, labial and posterior deirids (PDE) sensory neurons as early as the L1 stage and continuing throughout larval development. Expression is also seen in vulval tissue in L4 and adult animals.  

0 Life Stages

1 Parents

Definition Name Synonym Primary Identifier
An interfacial epithelial cell which forms a distal cap on a sheath cell to bind the sheath of a sensillum to the neighboring hypodermis, via adherens junctions. There is often a narrow opening through the socket from the exterior into the sheath channel, allowing ciliated dendrites to be exposed to the external environment. The socket cell functions similarly to a glial cell. socket cell   WBbt:0005750