WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  Several globin genes (C06E4.7, C09H10.8, C36E8.2, C52A11.2, F52A8.4, R01E6.6, R13A1.8, R90.5, and W01C9.5) are similarly upregulated in L3 and dauers relative to young adults, although some reach significance in dauers only. Many genes exhibited more than 2- fold upregulation but didn't reach statistical significance because strong upregulation was only seen in 2 biological replicates, A significant downregulation in L3 stage relative to young adults was observed for C26C6.7, T22C1.2 and ZK637.13. A similar trend was seen in dauers. C26C6.7 was the only globin which exressed at a significantly higher level in dauers relative to L3. Quantitative real-time RT-PCR experiments were done to compare the relative bundance of all 33 globins in wild type adults. Results demonstrate T22C1.2 and ZK637.13 are expressed at substantially higher levels. The difference with the other globins ranges within 1-3 orders of magnitude. Primary Identifier  Expr4890
Remark  Picture: Fig 5.
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0 Anatomy Terms

12 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007502 glb-4 C09H10.8 Caenorhabditis elegans
WBGene00007741 glb-8 C26C6.7 Caenorhabditis elegans
WBGene00007981 glb-11 C36E8.2 Caenorhabditis elegans
WBGene00008256 glb-12 C52A11.2 Caenorhabditis elegans
WBGene00009917 glb-18 F52A8.4 Caenorhabditis elegans
WBGene00010970 glb-20 R01E6.6 Caenorhabditis elegans
WBGene00011287 glb-24 R90.5 Caenorhabditis elegans
WBGene00011913 glb-26 T22C1.2 Caenorhabditis elegans
WBGene00012178 glb-27 W01C9.5 Caenorhabditis elegans
WBGene00014030 glb-1 ZK637.13 Caenorhabditis elegans
WBGene00015536 glb-2 C06E4.7 Caenorhabditis elegans
WBGene00020045 glb-23 R13A1.8 Caenorhabditis elegans

7 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041
  The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch. L3 larva Ce WBls:0000035
  A third stage larva specialized for dispersal and long term survival. dauer larva Ce WBls:0000032
  The whole period of embryogenesis in the nematode Caenorhabditis elegans, from the formation of an egg until hatching. embryo Ce WBls:0000003