WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Anatomy Term :

Definition  Ventral cord motor neuron, innervates ventral body muscles, probably reciprocal inhibitor Name  VD1
Primary Identifier  WBbt:0004609 Synonym  lineage name: W.pp

1 Children

Definition Name Synonym Primary Identifier
nucleus of pedigree W.pp W.pp nucleus   WBbt:0003230

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts enriched in VD_DD according to single cell RNAseq. Genes that pass the Bonferroni threshold for multiple comparisons (q < 0.05) are significantly enriched. WBPaper00061651:VD_DD_enriched

39 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
    Expr15619    
    Expr15558    
    Expr15560    
    Expr15567    
    Expr15571    
    Expr15572    
    Expr15573    
    Expr15579    
    Expr15586    
    Expr15651    
    Expr15652    
    Expr15589    
    Expr13158    
    Expr15591    
    Expr15598    
    Expr15604    
    Expr15608    
    Expr15611    
Lines expressing GFP::CED-10 were generated by injection of ced-10::gfp::ced-10 with an unc-76-rescuing construct, P76-16B, both at 75 ng/l, into unc-76(e911) animals.   Expr1734 Cell type identifications were confirmed by the examination of a nuclear-localized GFP expressed from the ced-10 promoter. GFP::CED-10 was expressed broadly, perhaps in all cells, including neurons (CANs, VDs and DDs), engulfing cell types (including the hypodermis, intestine and pharynx) and the distal tip cells. Expression was first seen in early embryogenesis and continued throughout adulthood in all cell types. Strong fluorescence was observed within the axons of the nerve ring. The GFP::CED-10 fusion protein accumulated at the plasma membrane.
    Expr15570    
    Expr15644    
    Expr15648    
    Expr15641    
    Expr15633    
    Expr15335    
    Expr13159    
Suncellular localization was revealed by another construct with GFP inserted at the carboxy terminus of the UNC-47 protein. This construct rescued the unc-47 mutant phenotype, demonstrating that the construct functions normally.   Expr1459 Animals containing the unc-47::GFP reporter construct showed expression of GFP in all GABAergic neurons, and only in GABAergic neurons. Done by another gfp construct: GFP-tagged UNC-47 was localized to synaptic varicosities along the ventral and dorsal cords but not in axons. show that unc-47 expression is associated with synaptic vesicle.
Reporter gene fusion type not specified. These expression patterns were identical to those for GABA, unc-47, and unc-25.   Expr1205 expressed in all GABAergic neurons, which include the 19 D neurons in the ventral cord, the four RMEs, AVL, and RIS in the head, and DVB in the tail.  
Reporter gene fusion type not specified.   Expr1206 expressed in all GABAergic neurons, which include the 19 D neurons in the ventral cord, the four RMEs, AVL, and RIS in the head, and DVB in the tail. These expression patterns were identical to those for GABA, unc-47, and unc-25.  
    Expr15441    

0 Life Stages

3 Parents

Definition Name Synonym Primary Identifier
Neuron class of thirteen motoneurons, with cell bodies in the ventral cord, which innervate ventral muscles. Each cell has an anteriorly directed process emanating from its cell body. VD neuron   WBbt:0005303
neuron whose cell body is in the retrovesicular ganglion. retrovesicular ganglion neuron retrovesicular ganglion WBbt:0005403
post-embryonic cell of pedigree W.p W.p   WBbt:0007571