WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Life Stage :

Definition  The nematode life-stage that begins when the organism is fully-developed and has reached maturity. Primary Identifier  WBls:0000104
Public Name  nematode adult

0 Anatomy Terms

1 Contained In

Remark Definition Other Name Public Name Primary Identifier
  Any developmental stage in a nematode, including embryo, larva and adult stage. Nematode life stage WBls:0000101

12 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Proteins that are enriched in digestive tract of adult female Brugia malayi. Protein quantitation was determined by normalized spectral abundance.Proteins with NSAF enrichment values of 2 or greater were were considered enriched within that fraction. WBPaper00048706:digestive-tract_enriched
  Proteins that are enriched in productive tract of adult female Brugia malayi. Protein quantitation was determined by normalized spectral abundance.Proteins with NSAF enrichment values of 2 or greater were were considered enriched within that fraction. WBPaper00048706:productive-tract_enriched
  Proteomic identification of immunoaffinity purified adult female O.volvulus proteins. Identifications were made with >0.1% False Discovery Rate (FDR) at the protein level. WBPaper00048881:immunoreactive
  Proteins that are only expressed in productive tract of adult female Brugia malayi. Protein quantitation was determined by normalized spectral abundance.Proteins with NSAF enrichment values of 2 or greater were were considered enriched within that fraction. WBPaper00048706:productive-tract_only
  Proteins that are enriched in body wall tract of adult female Brugia malayi. Protein quantitation was determined by normalized spectral abundance.Proteins with NSAF enrichment values of 2 or greater were were considered enriched within that fraction. WBPaper00048706:body-wall-tract_enriched
  Proteins that are only expressed in digestive tract of adult female Brugia malayi. Protein quantitation was determined by normalized spectral abundance.Proteins with NSAF enrichment values of 2 or greater were were considered enriched within that fraction. WBPaper00048706:digestive-tract_only
  P.pacificus genes enriched in intestine. Cuffdiff (version v2.0.1) WBPaper00049334:PE_intestine_enriched
Yeast culture: C.curvatus Transcripts that showed significantly decreased expression after fed with yeast culture C.curvatus, comparing to fed with OP50. Cuffdiff (version 2.0.1) WBPaper00050265:C.curvatus_vs_OP50_downregulated
Yeast culture: C.albidus Transcripts that showed significantly increased expression after fed with yeast culture C.albidus, comparing to fed with OP50. Cuffdiff (version 2.0.1) WBPaper00050265:C.albidus_vs_OP50_upregulated
  Proteins that are only expressed in body wall tract of adult female Brugia malayi. Protein quantitation was determined by normalized spectral abundance.Proteins with NSAF enrichment values of 2 or greater were were considered enriched within that fraction. WBPaper00048706:body-wall-tract_only
Yeast culture: C.albidus Transcripts that showed significantly decreased expression after fed with yeast culture C.albidus, comparing to fed with OP50. Cuffdiff (version 2.0.1) WBPaper00050265:C.albidus_vs_OP50_downregulated
Yeast culture: C.curvatus Transcripts that showed significantly increased expression after fed with yeast culture C.curvatus, comparing to fed with OP50. Cuffdiff (version 2.0.1) WBPaper00050265:C.curvatus_vs_OP50_upregulated

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
    Expr11516 The developmental profiles of Cbr-puf-2 and Cbr-puf-1.2 mRNA levels are qualitatively similar and are typical of germ line-expressed genes: low expression from embryo to L2 stages, slightly increasing expression at L3 and L4, and peak levels in adults. However, Cbr-puf-2 is over 100-fold more abundant than Cbr-puf-1.2.  
    Expr12465 A ppa-eud-1 transcriptional reporter was expressed in several classes of somatic and pharyngeal neurons, and RFP expression was seen consistently in all postembryonic stages.  
    Expr11506 In C remanei both larval and adult males produce high levels of fog-3, but neither larval nor adult females produce detectable levels of this message.  

0 Followed By

1 Preceded By

Remark Definition Other Name Public Name Primary Identifier
  The stage that begins after hatching and ends when the nematode becomes adult. nematode larval stage WBls:0000105

4 Sub Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041
  The life-stage that begins when a B. malayi individual is fully-developed and has reached maturity. Adult B. malayi (or at least adult females) can live for 10 years in a human host, and can outlive their rodent laboratory hosts; it is usual to state the chronological age of the nematodes in days or months post-infection, and occasionally post-patency (the production of first microfilariae). Brugia adult WBls:0000083
  The Strongyloides life-cycle stage during which a female adult worm produces larval progeny parthenogenetically within the host organism. Strongyloides parasitic female WBls:0000681
  The Strongyloides life-cycle stage in which male and female adult worms reproduce sexually and live entirely outside a host organism. Strongyloides free-living adult WBls:0000682