WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Anatomy Term :

Definition  Neuron class of two ciliated neurons that are part of the amphid sensilla; the endings are in the amphid channel, which is open to the outside. Name  ASI
Primary Identifier  WBbt:0005666

2 Children

Definition Name Synonym Primary Identifier
one member of Amphid neurons, single ciliated endings, probably chemo-sensory; project into ring via commissure from ventral ganglion, make diverse synaptic connections in ring neuropil ASIR lineage name: ABpraapapppa WBbt:0003887
one member of amphid neurons, single ciliated ending, probably chemo-sensory; project into ring via commissure from ventral ganglion, make diverse synaptic connections in ring neuropil ASIL lineage name: ABplaapapppa WBbt:0003888

4 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Top 300 transcripts enriched in ADF, ADL, AFD, ASE, ASG, ASH, ASI, ASJ, ASK, AWA, AWB, AWC according to single cell RNAseq. Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. WBPaper00061340:Ciliated_amphid_neuron
  Transcripts enriched in ASI according to single cell RNAseq. Genes that pass the Bonferroni threshold for multiple comparisons (q < 0.05) are significantly enriched. WBPaper00061651:ASI_enriched
  Transcripts that showed significantly altered expression in skn-1gf(lax188) comparing to in WT animals in ASI neuron. DESeq2, p-value < 0.05. WBPaper00066256:skn-1gf(lax188)_regulated
  Single-cell RNA-Seq cell group 114 expressed in: ASI. CellRanger, DecontX, Monocle3, Louvain algorithm. WBPaper00065623:114

0 Expression Patterns

0 Life Stages

2 Parents

Definition Name Synonym Primary Identifier
neuron of the amphid sensillum amphid neuron amphid sensory neuron WBbt:0005394
neuron that senses soluable chemicals chemosensory neuron   WBbt:0005837