WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Life Stage :

Definition  The fourth stage larva male. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. Primary Identifier  WBls:0000073
Public Name  L4 larva male Ce

0 Anatomy Terms

1 Contained In

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

8 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Genes with significantly decreased expression in spe-44(ok1400) comparing to N2. Microarray data were analyzed by Microarray Suite 5.0 (Affymetrix) and Genomics Suite (Partek) software, using a p-value threshold of 0.05 for differential expression. WBPaper00041071:spe-44_downregulated
  Transcripts that showed significantly increased expression in spe-44(fx110) comparing to in control male animals. DESeq2, fold change > 2 and a BenjaminiHochberg multiple hypothesis-corrected P-value cutoff of 0.05 was used as a cutoff for significant differen-tial expression. WBPaper00064502:spe-44(fx110)_upregulated
  Transcripts that showed significantly decreased expression in nhr-23(kry61);spe-44(fx110) comparing to in control male animals. DESeq2, fold change > 2 and a BenjaminiHochberg multiple hypothesis-corrected P-value cutoff of 0.05 was used as a cutoff for significant differen-tial expression. WBPaper00064502:nhr-23(kry61);spe-44(fx110)_downregulated
  Transcripts that showed significantly increased expression in nhr-23(kry61);spe-44(fx110) comparing to in control male animals. DESeq2, fold change > 2 and a BenjaminiHochberg multiple hypothesis-corrected P-value cutoff of 0.05 was used as a cutoff for significant differen-tial expression. WBPaper00064502:nhr-23(kry61);spe-44(fx110)_upregulated
  Transcripts that showed significantly increased expression in nhr-23(kry61) comparing to in control male animals. DESeq2, fold change > 2 and a BenjaminiHochberg multiple hypothesis-corrected P-value cutoff of 0.05 was used as a cutoff for significant differen-tial expression. WBPaper00064502:nhr-23(kry61)_upregulated
  Transcripts that showed significantly decreased expression in spe-44(fx110) comparing to in control male animals. DESeq2, fold change > 2 and a BenjaminiHochberg multiple hypothesis-corrected P-value cutoff of 0.05 was used as a cutoff for significant differen-tial expression. WBPaper00064502:spe-44(fx110)_downregulated
  Genes with significantly increased expression in spe-44(ok1400) comparing to N2. Microarray data were analyzed by Microarray Suite 5.0 (Affymetrix) and Genomics Suite (Partek) software, using a p-value threshold of 0.05 for differential expression. WBPaper00041071:spe-44_upregulated
  Transcripts that showed significantly decreased expression in nhr-23(kry61) comparing to in control male animals. DESeq2, fold change > 2 and a BenjaminiHochberg multiple hypothesis-corrected P-value cutoff of 0.05 was used as a cutoff for significant differen-tial expression. WBPaper00064502:nhr-23(kry61)_downregulated

0 Expression Patterns

0 Followed By

0 Preceded By

0 Sub Stages