WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Differentially regulated transcripts were determined by edgeR. For the microarray and NanoString analyses, genes were considered differentially regulated at FDR < 0.05 and log2 (Fold Change) > 1 or < 1. Description  Transcripts that showed significantly decreased expression in nipi-3(fr4) comparing to in N2.
Primary Identifier  WBPaper00050515:nipi-3(fr4)_downregulated
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0 Anatomy Terms

76 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000675 col-101 K02D7.3 Caenorhabditis elegans
WBGene00000716 col-143 T15B7.3 Caenorhabditis elegans
WBGene00001399 fat-7 F10D2.9 Caenorhabditis elegans
WBGene00001816 haf-6 Y48G8AL.11 Caenorhabditis elegans
WBGene00003828 nuc-1 C07B5.5 Caenorhabditis elegans
WBGene00005552 sri-40 Y27F2A.3 Caenorhabditis elegans
WBGene00006541 tbh-1 H13N06.6 Caenorhabditis elegans
WBGene00006636 tsp-10 T14B4.4 Caenorhabditis elegans
WBGene00006912 vha-3 Y38F2AL.4 Caenorhabditis elegans
WBGene00006925 vit-1 K09F5.2 Caenorhabditis elegans
WBGene00006927 vit-3 F59D8.1 Caenorhabditis elegans
WBGene00006928 vit-4 F59D8.2 Caenorhabditis elegans
WBGene00007362 cyp-35C1 C06B3.3 Caenorhabditis elegans
WBGene00007533 cbl-1 C12C8.2 Caenorhabditis elegans
WBGene00007605 hrg-7 C15C8.3 Caenorhabditis elegans
WBGene00007867 C32H11.4 C32H11.4 Caenorhabditis elegans
WBGene00008538 sqrd-1 F02H6.5 Caenorhabditis elegans
WBGene00008629 cpt-5 F09F3.9 Caenorhabditis elegans
WBGene00009192 asah-2 F27E5.1 Caenorhabditis elegans
WBGene00009429 irg-5 F35E12.5 Caenorhabditis elegans
WBGene00009493 hrg-4 F36H1.5 Caenorhabditis elegans
WBGene00009897 skpo-1 F49E12.1 Caenorhabditis elegans
WBGene00011112 R07E5.4 R07E5.4 Caenorhabditis elegans
WBGene00011388 T02G6.5 T02G6.5 Caenorhabditis elegans
WBGene00011879 pho-7 T21B6.2 Caenorhabditis elegans
WBGene00011979 sysm-1 T24B8.5 Caenorhabditis elegans
WBGene00012686 Y39B6A.27 Y39B6A.27 Caenorhabditis elegans
WBGene00012747 Y40H7A.10 Y40H7A.10 Caenorhabditis elegans
WBGene00013481 Y69H2.3 Y69H2.3 Caenorhabditis elegans
WBGene00015400 cyp-35A2 C03G6.15 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010700 nipi-3 K09A9.1 Caenorhabditis elegans

0 Regulated By Molecule