WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in F cell, U cell according to single cell RNAseq.
Primary Identifier  WBPaper00061340:F_U
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2 Anatomy Terms

Definition Name Synonym Primary Identifier
Rectal cell, blast cell in male F cell lineage name: ABplppppapp WBbt:0004799
Rectal cell, postembryonic blast cell in male U cell lineage name: ABplppppapa WBbt:0004942

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000075 adm-4 ZK154.7 Caenorhabditis elegans
WBGene00000170 aqp-2 C01G6.1 Caenorhabditis elegans
WBGene00000395 cdh-3 ZK112.7 Caenorhabditis elegans
WBGene00000449 ceh-27 F46F3.1 Caenorhabditis elegans
WBGene00000493 che-14 F56H1.1 Caenorhabditis elegans
WBGene00000523 clc-2 C01C10.1 Caenorhabditis elegans
WBGene00000526 clc-5 C01C10.4 Caenorhabditis elegans
WBGene00000584 cog-1 R03C1.3 Caenorhabditis elegans
WBGene00000648 col-72 W09G10.1 Caenorhabditis elegans
WBGene00000692 col-118 T11B7.3 Caenorhabditis elegans
WBGene00000719 col-146 T06E4.6 Caenorhabditis elegans
WBGene00000723 col-150 B0024.2 Caenorhabditis elegans
WBGene00000777 cpn-1 F43G9.9 Caenorhabditis elegans
WBGene00000872 cyk-1 F11H8.4 Caenorhabditis elegans
WBGene00000990 dhs-27 C04F6.5 Caenorhabditis elegans
WBGene00001001 dis-3 C04G2.6 Caenorhabditis elegans
WBGene00001006 dlg-1 C25F6.2 Caenorhabditis elegans
WBGene00001165 efn-4 F56A11.3 Caenorhabditis elegans
WBGene00001174 egl-5 C08C3.1 Caenorhabditis elegans
WBGene00001185 egl-17 F38G1.2 Caenorhabditis elegans
WBGene00001188 egl-20 W08D2.1 Caenorhabditis elegans
WBGene00001204 egl-38 C04G2.7 Caenorhabditis elegans
WBGene00001432 fkb-7 B0511.1 Caenorhabditis elegans
WBGene00001443 fli-1 B0523.5 Caenorhabditis elegans
WBGene00001628 gly-3 ZK688.8 Caenorhabditis elegans
WBGene00001631 gly-6 H38K22.5 Caenorhabditis elegans
WBGene00002030 hst-3.1 F40H3.5 Caenorhabditis elegans
WBGene00002094 ins-11 C17C3.4 Caenorhabditis elegans
WBGene00002113 ins-30 ZC334.2 Caenorhabditis elegans
WBGene00002127 inx-5 R09F10.4 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule