WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in ABarpaaa according to single cell RNAseq.
Primary Identifier  WBPaper00061340:ABarpaaa_lineage

1 Anatomy Terms

Definition Name Synonym Primary Identifier
embryonic cell ABarpaaa   WBbt:0006398

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000099 air-2 B0207.4 Caenorhabditis elegans
WBGene00000223 atf-7 C07G2.2 Caenorhabditis elegans
WBGene00000257 bmk-1 F23B12.8 Caenorhabditis elegans
WBGene00000275 bub-1 R06C7.8 Caenorhabditis elegans
WBGene00000301 cav-1 T13F2.8 Caenorhabditis elegans
WBGene00000405 cdk-1 T05G5.3 Caenorhabditis elegans
WBGene00000406 cdk-4 F18H3.5 Caenorhabditis elegans
WBGene00000411 cdl-1 R06F6.1 Caenorhabditis elegans
WBGene00000413 cdt-1 Y54E10A.15 Caenorhabditis elegans
WBGene00000422 ced-8 F08F1.5 Caenorhabditis elegans
WBGene00000425 ced-11 ZK512.3 Caenorhabditis elegans
WBGene00000448 pros-1 K12H4.1 Caenorhabditis elegans
WBGene00000451 ceh-30 C33D12.7 Caenorhabditis elegans
WBGene00000452 ceh-31 C33D12.1 Caenorhabditis elegans
WBGene00000463 ceh-43 C28A5.4 Caenorhabditis elegans
WBGene00000469 ces-2 ZK909.4 Caenorhabditis elegans
WBGene00000478 cfz-2 F27E11.3 Caenorhabditis elegans
WBGene00000503 cht-1 C04F6.3 Caenorhabditis elegans
WBGene00000591 coh-1 K08A8.3 Caenorhabditis elegans
WBGene00000674 col-99 F29C4.8 Caenorhabditis elegans
WBGene00000863 cya-1 ZK507.6 Caenorhabditis elegans
WBGene00000865 cyb-1 ZC168.4 Caenorhabditis elegans
WBGene00000875 cyk-4 K08E3.6 Caenorhabditis elegans
WBGene00000936 dbl-1 T25F10.2 Caenorhabditis elegans
WBGene00001002 div-1 R01H10.1 Caenorhabditis elegans
WBGene00001186 egl-18 F55A8.1 Caenorhabditis elegans
WBGene00001396 fat-4 T13F2.1 Caenorhabditis elegans
WBGene00001583 gfi-3 M163.4 Caenorhabditis elegans
WBGene00001689 gpr-2 C38C10.4 Caenorhabditis elegans
WBGene00001694 grd-5 F41E6.2 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule