WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Expression level cut-off of count per million (cpm) > 1 in all three CLIP replicates and a fold change (FC) > 3 compared with RNA-Seq of MINA-1::GFP animals. Description  Transcripts that physically interact with MINA-1-GFP, according to high-throughput sequencing with crosslinking immunoprecipitation (HITS-CLIP) experiment of synchronized MINA-1-GFP transgenic animals (opIs408).
Primary Identifier  WBPaper00056165:MINA-1_interacting_mRNA

0 Anatomy Terms

560 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000059 acr-20 R06A4.10 Caenorhabditis elegans
WBGene00000097 aip-1 F58E10.4 Caenorhabditis elegans
WBGene00000099 air-2 B0207.4 Caenorhabditis elegans
WBGene00000115 alh-9 F01F1.6 Caenorhabditis elegans
WBGene00000168 apx-1 K08D9.3 Caenorhabditis elegans
WBGene00000226 atl-1 T06E4.3 Caenorhabditis elegans
WBGene00000227 atm-1 Y48G1BL.2 Caenorhabditis elegans
WBGene00000247 bec-1 T19E7.3 Caenorhabditis elegans
WBGene00000249 bir-1 T27F2.3 Caenorhabditis elegans
WBGene00000366 cbp-1 R10E11.1 Caenorhabditis elegans
WBGene00000375 cyp-44A1 ZK177.5 Caenorhabditis elegans
WBGene00000382 cdc-6 C43E11.10 Caenorhabditis elegans
WBGene00000395 cdh-3 ZK112.7 Caenorhabditis elegans
WBGene00000409 cdk-8 F39H11.3 Caenorhabditis elegans
WBGene00000410 cdk-9 H25P06.2 Caenorhabditis elegans
WBGene00000413 cdt-1 Y54E10A.15 Caenorhabditis elegans
WBGene00000415 ced-1 Y47H9C.4 Caenorhabditis elegans
WBGene00000420 ced-6 F56D2.7 Caenorhabditis elegans
WBGene00000425 ced-11 ZK512.3 Caenorhabditis elegans
WBGene00000480 cgp-1 Y38C9A.2 Caenorhabditis elegans
WBGene00000485 che-3 F18C12.1 Caenorhabditis elegans
WBGene00000498 chk-1 Y39H10A.7 Caenorhabditis elegans
WBGene00000517 cki-2 T05A6.2 Caenorhabditis elegans
WBGene00000520 cku-80 R07E5.8 Caenorhabditis elegans
WBGene00000537 clk-2 C07H6.6 Caenorhabditis elegans
WBGene00000564 cnk-1 R01H10.8 Caenorhabditis elegans
WBGene00000645 col-69 K01A2.7 Caenorhabditis elegans
WBGene00000770 cpb-1 C40H1.1 Caenorhabditis elegans
WBGene00000772 cpb-3 B0414.5 Caenorhabditis elegans
WBGene00000835 cuc-1 ZK652.11 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008061 mina-1 C41G7.3 Caenorhabditis elegans

0 Regulated By Molecule