WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in DB1, DB2, DB3, DB4, DB5, DB6, DB7 according to single cell RNAseq.
Primary Identifier  WBPaper00061340:DB
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7 Anatomy Terms

Definition Name Synonym Primary Identifier
Ventral cord motor neurons, innervate dorsal muscles DB7 lineage name: ABprppaappp WBbt:0004840
Ventral cord motor neurons, innervate dorsal muscles DB3 lineage name: ABprpaaaapp WBbt:0004844
Ventral cord motor neurons, innervate dorsal muscles DB4 lineage name: ABprpappapp WBbt:0004843
Ventral cord motor neurons, innervate dorsal muscles DB5 lineage name: ABplpapappp WBbt:0004842
Ventral cord motor neurons, innervate dorsal muscles DB6 lineage name: ABplppaappp WBbt:0004841
Ventral cord motor neurons, innervate dorsal muscles DB2 lineage name: ABarappappa WBbt:0004845
Ventral cord motor neurons, innervate dorsal muscles DB1 lineage name: ABplpaaaapp WBbt:0004846

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000042 acr-2 K11G12.2 Caenorhabditis elegans
WBGene00000051 acr-12 R01E6.4 Caenorhabditis elegans
WBGene00000072 add-1 F39C12.2 Caenorhabditis elegans
WBGene00000079 adr-1 H15N14.1 Caenorhabditis elegans
WBGene00000164 apm-3 F53H8.1 Caenorhabditis elegans
WBGene00000176 aqp-8 K02G10.7 Caenorhabditis elegans
WBGene00000187 arl-1 F54C9.10 Caenorhabditis elegans
WBGene00000217 asp-4 R12H7.2 Caenorhabditis elegans
WBGene00000220 atf-2 K08F8.2 Caenorhabditis elegans
WBGene00000237 bam-2 Y71F9AR.1 Caenorhabditis elegans
WBGene00000238 bar-1 C54D1.6 Caenorhabditis elegans
WBGene00000248 ben-1 C54C6.2 Caenorhabditis elegans
WBGene00000407 cdk-5 T27E9.3 Caenorhabditis elegans
WBGene00000431 ceh-6 K02B12.1 Caenorhabditis elegans
WBGene00000437 ceh-13 R13A5.5 Caenorhabditis elegans
WBGene00000443 ceh-20 F31E3.1 Caenorhabditis elegans
WBGene00000464 ceh-44 Y54F10AM.4 Caenorhabditis elegans
WBGene00000665 col-90 C29E4.1 Caenorhabditis elegans
WBGene00000857 cwn-1 K10B4.6 Caenorhabditis elegans
WBGene00000952 del-1 E02H4.1 Caenorhabditis elegans
WBGene00000961 dgn-1 T21B6.1 Caenorhabditis elegans
WBGene00001170 egl-1 F23B12.9 Caenorhabditis elegans
WBGene00001210 egl-46 K11G9.4 Caenorhabditis elegans
WBGene00001249 elt-1 W09C2.1 Caenorhabditis elegans
WBGene00001368 exc-7 F35H8.5 Caenorhabditis elegans
WBGene00001385 far-1 F02A9.2 Caenorhabditis elegans
WBGene00001386 far-2 F02A9.3 Caenorhabditis elegans
WBGene00001627 gly-2 C55B7.2 Caenorhabditis elegans
WBGene00001648 goa-1 C26C6.2 Caenorhabditis elegans
WBGene00001669 gpa-7 R10H10.5 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule