WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in Y cell according to single cell RNAseq.
Primary Identifier  WBPaper00061340:Y
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1 Anatomy Terms

Definition Name Synonym Primary Identifier
Rectal cell at hatching, becomes PDA in hermaphrodite, postembryonic blast cell in male Y cell lineage name: ABprpppaaaa WBbt:0004578

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000075 adm-4 ZK154.7 Caenorhabditis elegans
WBGene00000111 alh-5 T08B1.3 Caenorhabditis elegans
WBGene00000224 atgp-1 F26D10.9 Caenorhabditis elegans
WBGene00000228 atn-1 W04D2.1 Caenorhabditis elegans
WBGene00000252 bli-2 F59E12.12 Caenorhabditis elegans
WBGene00000431 ceh-6 K02B12.1 Caenorhabditis elegans
WBGene00000493 che-14 F56H1.1 Caenorhabditis elegans
WBGene00000584 cog-1 R03C1.3 Caenorhabditis elegans
WBGene00000611 col-34 F36A4.10 Caenorhabditis elegans
WBGene00000692 col-118 T11B7.3 Caenorhabditis elegans
WBGene00000719 col-146 T06E4.6 Caenorhabditis elegans
WBGene00000723 col-150 B0024.2 Caenorhabditis elegans
WBGene00000726 col-153 F17C11.3 Caenorhabditis elegans
WBGene00000739 col-166 T07H6.3 Caenorhabditis elegans
WBGene00000762 coq-2 F57B9.4 Caenorhabditis elegans
WBGene00000872 cyk-1 F11H8.4 Caenorhabditis elegans
WBGene00000990 dhs-27 C04F6.5 Caenorhabditis elegans
WBGene00001064 dpy-2 T14B4.6 Caenorhabditis elegans
WBGene00001072 dpy-10 T14B4.7 Caenorhabditis elegans
WBGene00001089 dre-1 K04A8.6 Caenorhabditis elegans
WBGene00001165 efn-4 F56A11.3 Caenorhabditis elegans
WBGene00001174 egl-5 C08C3.1 Caenorhabditis elegans
WBGene00001188 egl-20 W08D2.1 Caenorhabditis elegans
WBGene00001311 end-3 F58E10.5 Caenorhabditis elegans
WBGene00001352 evl-14 H38K22.1 Caenorhabditis elegans
WBGene00001796 gtl-2 F54D1.5 Caenorhabditis elegans
WBGene00001821 ham-2 C07A12.1 Caenorhabditis elegans
WBGene00001876 his-2 T10C6.13 Caenorhabditis elegans
WBGene00001958 hlh-14 C18A3.8 Caenorhabditis elegans
WBGene00001960 hlh-16 DY3.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule