WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Gene expression profiles obtained with microarrays were analyzed by a multi-class t-test using Significance Analysis of Microarrays (SAM), implemented as part of the TMEV software package. Based on T statistics the test retrieves genes with a T value above a cutoff score estimated to give the desired false discovery rate (selected to be 10%). Description  Genes with expression level induced by bacteria strain PA14.
Primary Identifier  WBPaper00040990:PA14_upregulated Regulated By Treatment  Bacteria infection: Pseudomonas aeruginosa PA14

0 Anatomy Terms

257 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000067 act-5 T25C8.2 Caenorhabditis elegans
WBGene00000176 aqp-8 K02G10.7 Caenorhabditis elegans
WBGene00000195 arr-1 F53H8.2 Caenorhabditis elegans
WBGene00000208 trip-4 Y53F4B.15 Caenorhabditis elegans
WBGene00000239 bas-1 C05D2.4 Caenorhabditis elegans
WBGene00000277 cab-1 C23H4.1 Caenorhabditis elegans
WBGene00000282 cah-4 R01E6.3 Caenorhabditis elegans
WBGene00000373 cyp-14A5 F08F3.7 Caenorhabditis elegans
WBGene00000522 clc-1 C09F12.1 Caenorhabditis elegans
WBGene00000554 cnb-1 F55C10.1 Caenorhabditis elegans
WBGene00000602 col-13 F15H10.2 Caenorhabditis elegans
WBGene00000618 col-41 T10B10.1 Caenorhabditis elegans
WBGene00000668 col-93 W05B2.5 Caenorhabditis elegans
WBGene00000681 col-107 C34H4.4 Caenorhabditis elegans
WBGene00000691 col-117 T28C6.4 Caenorhabditis elegans
WBGene00000718 col-145 B0222.7 Caenorhabditis elegans
WBGene00000720 col-147 T06E4.4 Caenorhabditis elegans
WBGene00000753 col-180 C44C10.1 Caenorhabditis elegans
WBGene00000783 cpr-3 T10H4.12 Caenorhabditis elegans
WBGene00000789 cpz-2 M04G12.2 Caenorhabditis elegans
WBGene00000830 ctl-1 Y54G11A.6 Caenorhabditis elegans
WBGene00000831 ctl-2 Y54G11A.5 Caenorhabditis elegans
WBGene00000981 dhs-18 C45B11.3 Caenorhabditis elegans
WBGene00001158 ech-9 F01G10.3 Caenorhabditis elegans
WBGene00001330 eps-8 Y57G11C.24 Caenorhabditis elegans
WBGene00001398 fat-6 VZK822L.1 Caenorhabditis elegans
WBGene00001453 flp-10 T06C10.4 Caenorhabditis elegans
WBGene00001500 ftn-1 C54F6.14 Caenorhabditis elegans
WBGene00001501 ftn-2 D1037.3 Caenorhabditis elegans
WBGene00001564 icl-1 C05E4.9 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage after an hermaphrodite animal is fully-developed and reaches maturity. adult hermaphrodite Ce WBls:0000057

0 Processes

0 Regulated By Gene

0 Regulated By Molecule