WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Estimation of transcript abundance and significantly differentially expressed genes were identified by Cuffdiff using the quartile normalization method. Transcripts with a significant change between different conditions (adjusted p-value < 0.01 by the false discovery rate, FDR) were treated as signature for each comparison. Description  Genes that showed significantly altered expression between N2 and npr-1(ur89) strains exposed to either the nematocidal B. thuringiensis B-18247, the pathogenic P. aeruginosa PA14, or the control E. coli OP50 for 12 or 24 hours.
Primary Identifier  WBPaper00049498:npr-1(ur89)_regulated_5

0 Anatomy Terms

287 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000022 abt-4 Y39D8C.1 Caenorhabditis elegans
WBGene00000783 cpr-3 T10H4.12 Caenorhabditis elegans
WBGene00000841 cul-6 K08E7.7 Caenorhabditis elegans
WBGene00001158 ech-9 F01G10.3 Caenorhabditis elegans
WBGene00001770 gst-22 F21H7.1 Caenorhabditis elegans
WBGene00001817 haf-7 Y50E8A.16 Caenorhabditis elegans
WBGene00002041 hum-8 Y66H1A.6 Caenorhabditis elegans
WBGene00002058 ifd-2 F25E2.4 Caenorhabditis elegans
WBGene00002271 lec-8 R07B1.10 Caenorhabditis elegans
WBGene00002273 lec-10 W01A11.4 Caenorhabditis elegans
WBGene00002274 lec-11 F38A5.3 Caenorhabditis elegans
WBGene00003091 lys-2 Y22F5A.5 Caenorhabditis elegans
WBGene00003092 lys-3 Y22F5A.6 Caenorhabditis elegans
WBGene00003480 klf-3 F54H5.4 Caenorhabditis elegans
WBGene00003561 ncr-1 F02E8.6 Caenorhabditis elegans
WBGene00003605 nhr-6 C48D5.1 Caenorhabditis elegans
WBGene00003640 nhr-50 C06C6.5 Caenorhabditis elegans
WBGene00003653 nhr-63 C06C6.4 Caenorhabditis elegans
WBGene00003688 nhr-98 M02H5.6 Caenorhabditis elegans
WBGene00003702 nhr-112 Y70C5C.6 Caenorhabditis elegans
WBGene00003943 pbo-4 K09C8.1 Caenorhabditis elegans
WBGene00003957 pcp-2 F23B2.12 Caenorhabditis elegans
WBGene00003999 pgp-5 C05A9.1 Caenorhabditis elegans
WBGene00004052 parg-2 H23L24.5 Caenorhabditis elegans
WBGene00004053 tank-1 ZK1005.1 Caenorhabditis elegans
WBGene00004169 pqn-89 Y73B6BR.1 Caenorhabditis elegans
WBGene00005003 spp-18 F27C8.4 Caenorhabditis elegans
WBGene00005141 srd-64 Y22D7AR.8 Caenorhabditis elegans
WBGene00005548 sri-36 F33H12.5 Caenorhabditis elegans
WBGene00005657 srr-6 C13D9.1 Caenorhabditis elegans

0 Life Stages

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003807 npr-1 C39E6.6 Caenorhabditis elegans

0 Regulated By Molecule