WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Survival during heat stress was analyzed using a non-parametric (Mantel-Haenszel) Log rank test and presented as Kaplan-Meier survival curves (Prism software package). For the TSA analysis all full genome wide expression analyses involved comparisons of two groups and thus on a gene by gene basis, for each set, authors performed two-sample t-tests on the log2 transformed expression measures to derive raw p-values. The Benjamini and Hochberg was then used to report the inference adjusted for multiple comparisons (q-values), in their case controlling false discovery rate (FDR). Statistically significant differential expression was defined as FDR q-value <= 0.05, thereby controlling FDR at <= 0.05 for each set of comparisons. Shown here are heat shock vs control ratio and raw p_value based on two-sample t-test. Description  Genes for which heat shock F3 (fraction 3, containing heavy polysomes) versus control F3 is significantly increased.
Primary Identifier  WBPaper00037147:heatshock_upregulated Regulated By Treatment  heat shock

0 Anatomy Terms

678 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000097 aip-1 F58E10.4 Caenorhabditis elegans
WBGene00000099 air-2 B0207.4 Caenorhabditis elegans
WBGene00000121 aly-2 F23B2.6 Caenorhabditis elegans
WBGene00000144 apc-10 F15H10.3 Caenorhabditis elegans
WBGene00000145 apc-11 F35G12.9 Caenorhabditis elegans
WBGene00000147 aph-1 VF36H2L.1 Caenorhabditis elegans
WBGene00000151 apn-1 T05H10.2 Caenorhabditis elegans
WBGene00000155 app-1 W03G9.4 Caenorhabditis elegans
WBGene00000249 bir-1 T27F2.3 Caenorhabditis elegans
WBGene00000254 bli-4 K04F10.4 Caenorhabditis elegans
WBGene00000274 btf-1 F15D4.1 Caenorhabditis elegans
WBGene00000383 cdc-14 C17G10.4 Caenorhabditis elegans
WBGene00000388 cdc-25.3 ZK637.11 Caenorhabditis elegans
WBGene00000408 cdk-7 Y39G10AL.3 Caenorhabditis elegans
WBGene00000416 ced-2 Y41D4B.13 Caenorhabditis elegans
WBGene00000420 ced-6 F56D2.7 Caenorhabditis elegans
WBGene00000497 chs-2 F48A11.1 Caenorhabditis elegans
WBGene00000770 cpb-1 C40H1.1 Caenorhabditis elegans
WBGene00000787 cps-6 C41D11.8 Caenorhabditis elegans
WBGene00000867 cyb-2.2 H31G24.4 Caenorhabditis elegans
WBGene00000876 cyl-1 C52E4.6 Caenorhabditis elegans
WBGene00000886 cyn-10 B0252.4 Caenorhabditis elegans
WBGene00000913 daf-18 T07A9.6 Caenorhabditis elegans
WBGene00000935 daz-1 F56D1.7 Caenorhabditis elegans
WBGene00000965 dhs-1 C01G8.3 Caenorhabditis elegans
WBGene00001023 dnj-5 C04A2.7 Caenorhabditis elegans
WBGene00001031 dnj-13 F54D5.8 Caenorhabditis elegans
WBGene00001033 dnj-15 K08D10.2 Caenorhabditis elegans
WBGene00001060 dpf-7 R11E3.7 Caenorhabditis elegans
WBGene00001324 eor-1 R11E3.6 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage after an hermaphrodite animal is fully-developed and reaches maturity. adult hermaphrodite Ce WBls:0000057

0 Processes

0 Regulated By Gene

0 Regulated By Molecule