WormMine: ExpressionCluster WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_24-cell-embryo

• Algorithm: DESeq and EdgeR were used. A threshold of 1.5 log2 fold change and a p value <10 % were applied. let-418: wild-type; let-418(RNAi)-treated embryos; chd-3: chd-3(eh4);controlGFP(RNAi)-treated embryos; chd-3_let-418: chd-3(eh4); let-418(RNAi)-treated embryos. All fold changes are calculated versus wild-type;control(RNAi)-treated embryos. 1h and 3h correspond to the 24- and 100-cell stages, respectively.
• Description: Transcripts that showed significantly decreased expression in 24-cell stage embryo of chd-3(eh4)let-418(RNAi) animals, comparing to in N2 animals injected with gfp control RNAi vector.
• Primary Identifier: WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_24-cell-embryo

0 Anatomy Terms

682 Genes

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00000067	act-5	T25C8.2	Caenorhabditis elegans
WBGene00000088	aex-5	F32A7.6	Caenorhabditis elegans
WBGene00000136	amt-4	C05E11.5	Caenorhabditis elegans
WBGene00000144	apc-10	F15H10.3	Caenorhabditis elegans
WBGene00000169	aqp-1	F32A5.5	Caenorhabditis elegans
WBGene00000196	aars-1	W02B12.6	Caenorhabditis elegans
WBGene00000212	asm-2	ZK455.4	Caenorhabditis elegans
WBGene00000213	asm-3	W03G1.7	Caenorhabditis elegans
WBGene00000214	asp-1	Y39B6A.20	Caenorhabditis elegans
WBGene00000215	asp-2	T18H9.2	Caenorhabditis elegans
WBGene00000216	asp-3	H22K11.1	Caenorhabditis elegans
WBGene00000218	asp-5	F21F8.3	Caenorhabditis elegans
WBGene00000219	asp-6	F21F8.7	Caenorhabditis elegans
WBGene00000281	cah-3	K05G3.3	Caenorhabditis elegans
WBGene00000283	cah-5	R173.1	Caenorhabditis elegans
WBGene00000391	cdd-1	C47D2.2	Caenorhabditis elegans
WBGene00000465	cpg-1	C07G2.1	Caenorhabditis elegans
WBGene00000469	ces-2	ZK909.4	Caenorhabditis elegans
WBGene00000473	cey-2	F46F11.2	Caenorhabditis elegans
WBGene00000522	clc-1	C09F12.1	Caenorhabditis elegans
WBGene00000535	cpi-1	K08B4.6	Caenorhabditis elegans
WBGene00000609	col-20	F11G11.11	Caenorhabditis elegans
WBGene00000670	col-95	Y41C4A.16	Caenorhabditis elegans
WBGene00000673	col-98	F14F7.1	Caenorhabditis elegans
WBGene00000677	col-103	F56B3.1	Caenorhabditis elegans
WBGene00000713	col-140	F26F12.1	Caenorhabditis elegans
WBGene00000716	col-143	T15B7.3	Caenorhabditis elegans
WBGene00000751	col-178	C34F6.2	Caenorhabditis elegans
WBGene00000752	col-179	C34F6.3	Caenorhabditis elegans
WBGene00000754	col-181	W03G11.1	Caenorhabditis elegans

1 Life Stages

Remark	Definition	Other Name	Public Name	Primary Identifier
Levin M, Hashimshony T, Wagner F, Yanai I. Developmental milestones punctuate gene expression in the Caenorhabditis embryo. Dev Cell. 2012 May 15;22(5):1101-8. Epub 2012 May 3. PubMed PMID: 22560298. Supplementary table 1.	Fourth cleavage of the AB lineage. Contains 24 cells.		24-cell embryo Ce	WBls:0000085

0 Processes

2 Regulated By Gene

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00000482	chd-3	T14G8.1	Caenorhabditis elegans
WBGene00002637	let-418	F26F12.7	Caenorhabditis elegans

0 Regulated By Molecule