WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  MS mass tolerance was set to 10 ppm, while MS-MS tolerance was set to 0.6 Da. Peptide validation was performed using Percolator and peptide false discovery rate (FDR) was set to 0.01. For additional filtering, maximum peptide rank was set to 1 and minimum number of peptides per protein was set to 2. Protein grouping was performed, in order to avoid presence of different proteins identified by non-unique peptides. Description  Proteins that physically interact with UTX-1, according to immunoprecipitation of UTX-1-GFP and mass spectrometry.
Primary Identifier  WBPaper00041072:UTX-1_interacting_protein

0 Anatomy Terms

364 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000064 act-2 T04C12.5 Caenorhabditis elegans
WBGene00000066 act-4 M03F4.2 Caenorhabditis elegans
WBGene00000067 act-5 T25C8.2 Caenorhabditis elegans
WBGene00000107 alh-1 F54D8.3 Caenorhabditis elegans
WBGene00000115 alh-9 F01F1.6 Caenorhabditis elegans
WBGene00000118 alh-12 Y69F12A.2 Caenorhabditis elegans
WBGene00000182 arf-1 B0336.2 Caenorhabditis elegans
WBGene00000197 aars-2 F28H1.3 Caenorhabditis elegans
WBGene00000200 arx-2 K07C5.1 Caenorhabditis elegans
WBGene00000204 arx-6 C35D10.16 Caenorhabditis elegans
WBGene00000205 arx-7 M01B12.3 Caenorhabditis elegans
WBGene00000217 asp-4 R12H7.2 Caenorhabditis elegans
WBGene00000229 atp-2 C34E10.6 Caenorhabditis elegans
WBGene00000248 ben-1 C54C6.2 Caenorhabditis elegans
WBGene00000293 cap-2 M106.5 Caenorhabditis elegans
WBGene00000301 cav-1 T13F2.8 Caenorhabditis elegans
WBGene00000377 cct-1 T05C12.7 Caenorhabditis elegans
WBGene00000378 cct-2 T21B10.7 Caenorhabditis elegans
WBGene00000379 cct-4 K01C8.10 Caenorhabditis elegans
WBGene00000380 cct-5 C07G2.3 Caenorhabditis elegans
WBGene00000381 cct-6 F01F1.8 Caenorhabditis elegans
WBGene00000776 cpl-1 T03E6.7 Caenorhabditis elegans
WBGene00000814 csn-2 B0025.2 Caenorhabditis elegans
WBGene00000815 csn-3 Y38C1AA.2 Caenorhabditis elegans
WBGene00000816 csn-4 Y55F3AM.15 Caenorhabditis elegans
WBGene00000817 csn-5 B0547.1 Caenorhabditis elegans
WBGene00000818 csn-6 Y67H2A.6 Caenorhabditis elegans
WBGene00000822 csq-1 F40E10.3 Caenorhabditis elegans
WBGene00000830 ctl-1 Y54G11A.6 Caenorhabditis elegans
WBGene00000831 ctl-2 Y54G11A.5 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  All C. elegans development stages, including embryo, larva and adult stage. all stages Ce WBls:0000002

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010746 K10D11.2 K10D11.2 Caenorhabditis elegans

0 Regulated By Molecule