WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Comparisons were made between genotypes by subtracting the mean log value of one ratio from another, and the significance of the difference was evaluated using Student t-test for two populations. For the fem-3(gf) versus fem-1(lf) direct comparison, authors performed the same analysis, except they used a Students t-test for one population. Author chose a combination of a twofold difference with a t value exceeding 99% confidence (P < 0.01), because these criteria allowed the inclusion of essentially all genes that had previously been identified as germline-enriched in a wt/glp-4 hermaphrodite comparison. Additionally, requiring a twofold difference reduced false positives, as the number of genes with two-fold difference and a P<0.01 only included ~100 genes more than with P < 0.001, and almost all genes showed germline expression by in situ hybridization. Description  hermaphrodite soma-enriched
Primary Identifier  [cgc6390]:herm_soma-enriched

0 Anatomy Terms

422 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000005 aat-4 T13A10.10 Caenorhabditis elegans
WBGene00000072 add-1 F39C12.2 Caenorhabditis elegans
WBGene00000082 adt-1 C02B4.1 Caenorhabditis elegans
WBGene00000084 aex-1 D2030.10 Caenorhabditis elegans
WBGene00000117 alh-11 F42G9.5 Caenorhabditis elegans
WBGene00000118 alh-12 Y69F12A.2 Caenorhabditis elegans
WBGene00000136 amt-4 C05E11.5 Caenorhabditis elegans
WBGene00000139 amx-3 F25C8.2 Caenorhabditis elegans
WBGene00000145 apc-11 F35G12.9 Caenorhabditis elegans
WBGene00000639 col-63 ZK265.2 Caenorhabditis elegans
WBGene00000725 col-152 F32G8.5 Caenorhabditis elegans
WBGene00000761 coq-1 C24A11.9 Caenorhabditis elegans
WBGene00000983 dhs-20 F35B12.2 Caenorhabditis elegans
WBGene00001027 dnj-9 F11G11.7 Caenorhabditis elegans
WBGene00001044 dnj-26 Y39C12A.8 Caenorhabditis elegans
WBGene00001055 dpf-2 C27C12.7 Caenorhabditis elegans
WBGene00001149 bcat-1 K02A4.1 Caenorhabditis elegans
WBGene00001155 ech-6 T05G5.6 Caenorhabditis elegans
WBGene00001158 ech-9 F01G10.3 Caenorhabditis elegans
WBGene00001182 egl-13 T22B7.1 Caenorhabditis elegans
WBGene00001240 elo-2 F11E6.5 Caenorhabditis elegans
WBGene00001243 elo-5 F41H10.7 Caenorhabditis elegans
WBGene00001338 ears-2 T07A9.2 Caenorhabditis elegans
WBGene00001403 fbl-1 F56H11.1 Caenorhabditis elegans
WBGene00001566 acdh-13 C28C12.9 Caenorhabditis elegans
WBGene00001578 ges-1 R12A1.4 Caenorhabditis elegans
WBGene00001819 haf-9 ZK484.2 Caenorhabditis elegans
WBGene00002057 ifd-1 R04E5.10 Caenorhabditis elegans
WBGene00002058 ifd-2 F25E2.4 Caenorhabditis elegans
WBGene00002130 inx-8 ZK792.2 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage after an hermaphrodite animal is fully-developed and reaches maturity. adult hermaphrodite Ce WBls:0000057

0 Processes

0 Regulated By Gene

0 Regulated By Molecule