WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in AVAL, AVAR according to single cell RNAseq.
Primary Identifier  WBPaper00061340:AVA
Paste the following link
Lists
This ExpressionCluster isn't in any lists. Upload a list.

2 Anatomy Terms

Definition Name Synonym Primary Identifier
Ventral cord interneuron, synapses onto VA, DA, and AS motor neurons; formerly called alpha AVAL lineage name: ABalppaaapa WBbt:0003870
Ventral cord interneuron, synapses onto VA, DA, and AS motor neurons; formerly called alpha AVAR lineage name: ABalaappapa WBbt:0003869

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000004 aat-3 F52H2.2 Caenorhabditis elegans
WBGene00000048 acr-9 C40C9.2 Caenorhabditis elegans
WBGene00000053 acr-14 T05C12.2 Caenorhabditis elegans
WBGene00000054 acr-15 F25G6.4 Caenorhabditis elegans
WBGene00000055 acr-16 F25G6.3 Caenorhabditis elegans
WBGene00000068 acy-1 F17C8.1 Caenorhabditis elegans
WBGene00000072 add-1 F39C12.2 Caenorhabditis elegans
WBGene00000086 aex-3 C02H7.3 Caenorhabditis elegans
WBGene00000224 atgp-1 F26D10.9 Caenorhabditis elegans
WBGene00000232 avr-14 B0207.12 Caenorhabditis elegans
WBGene00000248 ben-1 C54C6.2 Caenorhabditis elegans
WBGene00000279 cah-1 F54D8.4 Caenorhabditis elegans
WBGene00000392 cdd-2 F49E8.4 Caenorhabditis elegans
WBGene00000436 ceh-12 F33D11.4 Caenorhabditis elegans
WBGene00000464 ceh-44 Y54F10AM.4 Caenorhabditis elegans
WBGene00000553 cmk-1 K07A9.2 Caenorhabditis elegans
WBGene00000644 col-68 C50D2.4 Caenorhabditis elegans
WBGene00000723 col-150 B0024.2 Caenorhabditis elegans
WBGene00000874 cyk-3 ZK328.1 Caenorhabditis elegans
WBGene00000936 dbl-1 T25F10.2 Caenorhabditis elegans
WBGene00001163 efn-2 C43F9.8 Caenorhabditis elegans
WBGene00001189 egl-21 F01D4.4 Caenorhabditis elegans
WBGene00001335 F35A5.8 F35A5.8 Caenorhabditis elegans
WBGene00001400 fax-1 F56E3.4 Caenorhabditis elegans
WBGene00001433 fkb-8 Y18D10A.25 Caenorhabditis elegans
WBGene00001461 flp-18 Y48D7A.2 Caenorhabditis elegans
WBGene00001475 fmi-1 F15B9.7 Caenorhabditis elegans
WBGene00001489 frm-2 T04C9.6 Caenorhabditis elegans
WBGene00001612 glr-1 C06E1.4 Caenorhabditis elegans
WBGene00001613 glr-2 B0280.12 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule