WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  DESeq2, adjusted p value < 0.01 and absolute log2FC > = 1. Description  Transcripts that showed significantly increased expression in jmjd-5(zr1234) germine comparing to in N2 germline at 25 centigrade. Positive log2FC designates downregualted genes and vice versa.
Primary Identifier  WBPaper00062156:jmjd-5(zr1234)_upregulated_germline
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1 Anatomy Terms

Definition Name Synonym Primary Identifier
cell line which early in development becomes differentiated from the remaining somatic cell line, and alone has the potential to undergo meiosis and form gametes. germ line germline WBbt:0005784

125 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000161 apa-2 T20B5.1 Caenorhabditis elegans
WBGene00000443 ceh-20 F31E3.1 Caenorhabditis elegans
WBGene00000460 ceh-39 T26C11.7 Caenorhabditis elegans
WBGene00000483 che-1 C55B7.12 Caenorhabditis elegans
WBGene00000673 col-98 F14F7.1 Caenorhabditis elegans
WBGene00000884 cyn-8 D1009.2 Caenorhabditis elegans
WBGene00000975 dhs-12 K08F4.9 Caenorhabditis elegans
WBGene00001149 bcat-1 K02A4.1 Caenorhabditis elegans
WBGene00001151 ech-2 F38H4.8 Caenorhabditis elegans
WBGene00001436 fkh-4 C29F7.5 Caenorhabditis elegans
WBGene00001480 fmo-5 H24K24.5 Caenorhabditis elegans
WBGene00001791 gst-43 Y71F9AL.5 Caenorhabditis elegans
WBGene00001898 his-24 M163.3 Caenorhabditis elegans
WBGene00001931 his-57 F54E12.5 Caenorhabditis elegans
WBGene00001933 his-59 F55G1.2 Caenorhabditis elegans
WBGene00001934 his-60 F55G1.11 Caenorhabditis elegans
WBGene00001935 his-61 F55G1.10 Caenorhabditis elegans
WBGene00001936 his-62 F55G1.3 Caenorhabditis elegans
WBGene00001937 his-63 F22B3.2 Caenorhabditis elegans
WBGene00001939 his-65 H02I12.7 Caenorhabditis elegans
WBGene00001940 his-66 H02I12.6 Caenorhabditis elegans
WBGene00001942 his-68 T23D8.6 Caenorhabditis elegans
WBGene00002007 hsp-3 C15H9.6 Caenorhabditis elegans
WBGene00002124 inx-2 F08G12.10 Caenorhabditis elegans
WBGene00002186 kel-10 T16H12.6 Caenorhabditis elegans
WBGene00002253 lbp-1 F40F4.3 Caenorhabditis elegans
WBGene00003518 nac-2 R107.1 Caenorhabditis elegans
WBGene00003963 pdi-2 C07A12.4 Caenorhabditis elegans
WBGene00004356 rhi-1 F46H6.1 Caenorhabditis elegans
WBGene00004918 snr-5 ZK652.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007387 jmjd-5 C06H2.3 Caenorhabditis elegans

0 Regulated By Molecule