WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  CellRanger, DecontX, Monocle3, Louvain algorithm. Description  Single-cell RNA-Seq cell group 164 expressed in: g1A (pharyngeal gland) .
Primary Identifier  WBPaper00065623:164

6 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of eleven motoneurons, distributed along the ventral cord, which innervate ventral body muscles. VB neuron   WBbt:0005336
Neuron class of two pharyngeal interneuron. I2 neuron   WBbt:0003645
Pharyngeal gland cell 1AL. g1AL lineage name: MSaapaapaa WBbt:0004532
Pharyngeal gland cell 1AR, before fusion into g1ARP. g1AR lineage name: MSpapaapaa WBbt:0004530
Neuron class of three interneurons, which send processes anteriorly up the sub-lateral cords in the head. SAB   WBbt:0005396
Neuron class of two interneurons with cell bodies situated in the lumbar ganglia. LUA   WBbt:0008031

10 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003531 nas-12 C24F3.3 Caenorhabditis elegans
WBGene00007868 srlf-4 C32H11.5 Caenorhabditis elegans
WBGene00011869 dod-6 T20G5.7 Caenorhabditis elegans
WBGene00016732 phat-1 C46H11.8 Caenorhabditis elegans
WBGene00020237 phat-4 T05B4.3 Caenorhabditis elegans
WBGene00016731 C46H11.7 C46H11.7 Caenorhabditis elegans
WBGene00013387 Y62F5A.9 Y62F5A.9 Caenorhabditis elegans
WBGene00015103 B0280.7 B0280.7 Caenorhabditis elegans
WBGene00014006 srlf-30 ZK596.1 Caenorhabditis elegans
WBGene00016781 phat-7 C49G7.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule