WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  The EdgeR package v 3.24.0 was used to determine fold changes (Fc) and false discovery rates (FDR) of differential transcript abundances. (FDR < 0.05 AND Fc > 4). Description  Transcripts that showed significantly increased expression in strain GW1125 [lsm-8(-/-)] comparing to WT N2 at L1 larva stage.
Primary Identifier  WBPaper00059527:lsm-1_downregulated_L1
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0 Anatomy Terms

58 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000718 col-145 B0222.7 Caenorhabditis elegans
WBGene00000719 col-146 T06E4.6 Caenorhabditis elegans
WBGene00001564 icl-1 C05E4.9 Caenorhabditis elegans
WBGene00001944 his-70 E03A3.4 Caenorhabditis elegans
WBGene00002016 hsp-16.2 Y46H3A.3 Caenorhabditis elegans
WBGene00002018 hsp-16.41 Y46H3A.2 Caenorhabditis elegans
WBGene00002026 hsp-70 C12C8.1 Caenorhabditis elegans
WBGene00003082 lsm-8 Y73B6BL.32 Caenorhabditis elegans
WBGene00003629 nhr-38 K01H12.3 Caenorhabditis elegans
WBGene00004084 pph-2 C29E6.3 Caenorhabditis elegans
WBGene00005183 srg-26 C10G8.1 Caenorhabditis elegans
WBGene00005309 srh-88 C44C3.9 Caenorhabditis elegans
WBGene00006076 str-8 T23D5.11 Caenorhabditis elegans
WBGene00007036 sod-5 ZK430.3 Caenorhabditis elegans
WBGene00007961 C35D6.4 C35D6.4 Caenorhabditis elegans
WBGene00008097 ugt-15 C44H9.1 Caenorhabditis elegans
WBGene00009221 acs-2 F28F8.2 Caenorhabditis elegans
WBGene00009691 F44E5.4 F44E5.4 Caenorhabditis elegans
WBGene00009692 F44E5.5 F44E5.5 Caenorhabditis elegans
WBGene00009753 scrm-6 F46A8.10 Caenorhabditis elegans
WBGene00009892 scl-11 F49E11.6 Caenorhabditis elegans
WBGene00011052 arrd-11 R06B9.1 Caenorhabditis elegans
WBGene00011325 T01C3.11 T01C3.11 Caenorhabditis elegans
WBGene00011666 T09F5.2 T09F5.2 Caenorhabditis elegans
WBGene00012050 nhr-223 T26E4.8 Caenorhabditis elegans
WBGene00012959 Y47H10A.3 Y47H10A.3 Caenorhabditis elegans
WBGene00014047 clec-61 ZK666.7 Caenorhabditis elegans
WBGene00016168 C27F2.6 C27F2.6 Caenorhabditis elegans
WBGene00019730 asns-2 M02D8.4 Caenorhabditis elegans
WBGene00020882 T28A11.20 T28A11.20 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003076 lsm-1 F40F8.9 Caenorhabditis elegans

0 Regulated By Molecule