WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  P values are derived from two-sided exact test used in the R package edgeR and the FDR values are BenjaminiHochberg adjusted P values. FDR < 0.05 (set by WormBase Curator). Description  Transcripts differentially expressed between AWA neurons of adult hermaphrodite worms exposed to P. fluorescens and AWA neurons of adult hermaphrodite worms exposed to OP50 for 4-6 hours.
Primary Identifier  WBPaper00064871:P.fluorescens_downregulated_AWA Regulated By Treatment  Bacteria infection: P. fluorescens

1 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of two ciliated neurons that are associated with the sheath cells of the amphid sensilla. AWA   WBbt:0005670

16 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000988 dhs-25 F09E10.3 Caenorhabditis elegans
WBGene00004062 pmp-5 T10H9.5 Caenorhabditis elegans
WBGene00005444 srh-237 T05E12.7 Caenorhabditis elegans
WBGene00007605 hrg-7 C15C8.3 Caenorhabditis elegans
WBGene00008205 sams-1 C49F5.1 Caenorhabditis elegans
WBGene00009334 F32D8.12 F32D8.12 Caenorhabditis elegans
WBGene00012608 hphd-1 Y38F1A.6 Caenorhabditis elegans
WBGene00012633 Y38H6C.21 Y38H6C.21 Caenorhabditis elegans
WBGene00016943 acdh-1 C55B7.4 Caenorhabditis elegans
WBGene00018138 folt-2 F37B4.7 Caenorhabditis elegans
WBGene00044058 F17B5.6 F17B5.6 Caenorhabditis elegans
WBGene00008436 DH11.2 DH11.2 Caenorhabditis elegans
WBGene00284847 F54D8.10 F54D8.10 Caenorhabditis elegans
WBGene00017567 F18E3.11 F18E3.11 Caenorhabditis elegans
WBGene00045275 F18E3.12 F18E3.12 Caenorhabditis elegans
WBGene00011487 T05E12.6 T05E12.6 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule