WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in ILsoL, ILsoR, ILsoDL, ILsoDR, ILsoVL, ILsoVR according to single cell RNAseq.
Primary Identifier  WBPaper00061340:ILso

6 Anatomy Terms

Definition Name Synonym Primary Identifier
Inner labial socket ILsoDL lineage name: ABplaapaaap WBbt:0004521
Inner labial socket ILsoDR lineage name: ABpraapaaap WBbt:0004519
Inner labial socket ILsoL lineage name: ABalaaapall WBbt:0004518
Inner labial socket ILsoR lineage name: ABalaaapprr WBbt:0004517
Inner labial socket ILsoVL lineage name: ABalppapapp WBbt:0004503
Inner labial socket ILsoVR lineage name: ABarapppapp WBbt:0004501

299 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
WBGene00000170 aqp-2 C01G6.1 Caenorhabditis elegans
WBGene00000220 atf-2 K08F8.2 Caenorhabditis elegans
WBGene00000253 bli-3 F56C11.1 Caenorhabditis elegans
WBGene00000415 ced-1 Y47H9C.4 Caenorhabditis elegans
WBGene00000449 ceh-27 F46F3.1 Caenorhabditis elegans
WBGene00000451 ceh-30 C33D12.7 Caenorhabditis elegans
WBGene00000452 ceh-31 C33D12.1 Caenorhabditis elegans
WBGene00000463 ceh-43 C28A5.4 Caenorhabditis elegans
WBGene00000493 che-14 F56H1.1 Caenorhabditis elegans
WBGene00000526 clc-5 C01C10.4 Caenorhabditis elegans
WBGene00000603 col-14 C46A5.3 Caenorhabditis elegans
WBGene00000610 col-33 F36A4.6 Caenorhabditis elegans
WBGene00000611 col-34 F36A4.10 Caenorhabditis elegans
WBGene00000630 col-53 M01A12.1 Caenorhabditis elegans
WBGene00000644 col-68 C50D2.4 Caenorhabditis elegans
WBGene00000645 col-69 K01A2.7 Caenorhabditis elegans
WBGene00000664 col-89 F17C8.2 Caenorhabditis elegans
WBGene00000685 col-111 F29B9.9 Caenorhabditis elegans
WBGene00000727 col-154 F55C10.2 Caenorhabditis elegans
WBGene00000728 col-155 F55C10.3 Caenorhabditis elegans
WBGene00000747 col-174 F46C8.2 Caenorhabditis elegans
WBGene00000750 col-177 F59F3.2 Caenorhabditis elegans
WBGene00000759 col-186 E03G2.4 Caenorhabditis elegans
WBGene00000901 daf-5 W01G7.1 Caenorhabditis elegans
WBGene00000979 dhs-16 C10F3.2 Caenorhabditis elegans
WBGene00001089 dre-1 K04A8.6 Caenorhabditis elegans
WBGene00001186 egl-18 F55A8.1 Caenorhabditis elegans
WBGene00001253 elt-6 F52C12.5 Caenorhabditis elegans
WBGene00001368 exc-7 F35H8.5 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule