WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in MSpaaaaa according to single cell RNAseq.
Primary Identifier  WBPaper00061340:M4_parent

1 Anatomy Terms

Definition Name Synonym Primary Identifier
embryonic cell MSpaaaaa   WBbt:0006363

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000202 exos-4.2 Y6D11A.1 Caenorhabditis elegans
WBGene00000277 cab-1 C23H4.1 Caenorhabditis elegans
WBGene00000289 cam-1 C01G6.8 Caenorhabditis elegans
WBGene00000301 cav-1 T13F2.8 Caenorhabditis elegans
WBGene00000411 cdl-1 R06F6.1 Caenorhabditis elegans
WBGene00000417 ced-3 C48D1.2 Caenorhabditis elegans
WBGene00000449 ceh-27 F46F3.1 Caenorhabditis elegans
WBGene00000455 ceh-34 C10G8.6 Caenorhabditis elegans
WBGene00000674 col-99 F29C4.8 Caenorhabditis elegans
WBGene00000772 cpb-3 B0414.5 Caenorhabditis elegans
WBGene00000787 cps-6 C41D11.8 Caenorhabditis elegans
WBGene00000863 cya-1 ZK507.6 Caenorhabditis elegans
WBGene00001049 dog-1 F33H2.1 Caenorhabditis elegans
WBGene00001208 egl-44 F28B12.2 Caenorhabditis elegans
WBGene00001210 egl-46 K11G9.4 Caenorhabditis elegans
WBGene00001377 eya-1 C49A1.4 Caenorhabditis elegans
WBGene00001411 fem-1 F35D6.1 Caenorhabditis elegans
WBGene00001653 gon-4 K04D7.5 Caenorhabditis elegans
WBGene00001671 gpa-9 F56H9.4 Caenorhabditis elegans
WBGene00001755 gst-7 F11G11.2 Caenorhabditis elegans
WBGene00001835 hda-2 C08B11.2 Caenorhabditis elegans
WBGene00001853 hil-2 Y73B6BL.9 Caenorhabditis elegans
WBGene00001854 hil-3 F22F1.1 Caenorhabditis elegans
WBGene00001898 his-24 M163.3 Caenorhabditis elegans
WBGene00001941 his-67 T23D8.5 Caenorhabditis elegans
WBGene00001949 hlh-2 M05B5.5 Caenorhabditis elegans
WBGene00001958 hlh-14 C18A3.8 Caenorhabditis elegans
WBGene00001962 hlh-19 F57C12.3 Caenorhabditis elegans
WBGene00001971 hmg-1.1 Y48B6A.14 Caenorhabditis elegans
WBGene00001972 hmg-1.2 F47D12.4 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule