WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Filtering for high-quality data resulted in 7,880 genes with expression values >2.5 fold over background in >70% of the microarrays. These gene expression profiles were analyzed with the SAM microarray analysis package; a two-class testing configuration was used to identify genes differentially-expressed during infection in untreated worms compared to elt-2(RNAi) worms, with a false discovery rate of 9%. Description  Genes that showed significantly decreased expression in elt-2(RNAi) comparing to in control RNAi worms.
Primary Identifier  WBPaper00046858:elt-2(RNAi)_downregulated

0 Anatomy Terms

43 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000149 apl-1 C42D8.8 Caenorhabditis elegans
WBGene00000664 col-89 F17C8.2 Caenorhabditis elegans
WBGene00000681 col-107 C34H4.4 Caenorhabditis elegans
WBGene00000733 col-160 F57B1.4 Caenorhabditis elegans
WBGene00001000 dim-1 C18A11.7 Caenorhabditis elegans
WBGene00001172 egl-3 C51E3.7 Caenorhabditis elegans
WBGene00001685 gpd-3 K10B3.7 Caenorhabditis elegans
WBGene00002050 ifa-1 F38B2.1 Caenorhabditis elegans
WBGene00002179 jph-1 T22C1.7 Caenorhabditis elegans
WBGene00002348 myo-1 R06C7.10 Caenorhabditis elegans
WBGene00002978 lev-11 Y105E8B.1 Caenorhabditis elegans
WBGene00003175 mec-12 C44B11.3 Caenorhabditis elegans
WBGene00003370 mlc-2 C36E6.5 Caenorhabditis elegans
WBGene00003514 myo-2 T18D3.4 Caenorhabditis elegans
WBGene00003596 ngp-1 T19A6.2 Caenorhabditis elegans
WBGene00004220 ptr-5 C53C11.3 Caenorhabditis elegans
WBGene00004222 ptr-8 F44F4.4 Caenorhabditis elegans
WBGene00006321 sup-12 T22B2.4 Caenorhabditis elegans
WBGene00006660 twk-5 B0334.2 Caenorhabditis elegans
WBGene00006762 unc-25 Y37D8A.23 Caenorhabditis elegans
WBGene00006780 unc-44 B0350.2 Caenorhabditis elegans
WBGene00008628 ttr-21 F09F3.6 Caenorhabditis elegans
WBGene00009340 best-14 F32G8.4 Caenorhabditis elegans
WBGene00009896 scl-3 F49E11.11 Caenorhabditis elegans
WBGene00009983 cut-2 F53F1.5 Caenorhabditis elegans
WBGene00011906 hsp-12.1 T22A3.2 Caenorhabditis elegans
WBGene00013456 Y67A10A.7 Y67A10A.7 Caenorhabditis elegans
WBGene00015332 tyr-1 C02C2.1 Caenorhabditis elegans
WBGene00015480 C05D10.4 C05D10.4 Caenorhabditis elegans
WBGene00017184 ncam-1 F02G3.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 48-72 hours after L4-adult molt. 5-6 days after first cleavage. 2-days post-L4 adult hermaphrodite Ce WBls:0000065

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001250 elt-2 C33D3.1 Caenorhabditis elegans

0 Regulated By Molecule